RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-219ENST00000522006 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-219ENST00000522006 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-219ENST00000522006 TACC1O75410 805 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 F13A1P00488 732 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 RTN1Q16799 776 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 BMP15O95972 392 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-219ENST00000522006 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 TMEM110-MUSTN1A8MSY1 372 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 SELENOSQ9BQE4 189 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 DACT1Q9NYF0 836 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
LAMA4-219ENST00000522006 GSTO1P78417 241 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 TTC16Q8NEE8 873 aa12.97□□□□□ -0.33
LAMA4-219ENST00000522006 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 TERF1P54274 439 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
LAMA4-219ENST00000522006 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
LAMA4-219ENST00000522006 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 KIF14Q15058 1648 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
LAMA4-219ENST00000522006 CAPZA3Q96KX2 299 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.96□□□□□ -0.33
LAMA4-219ENST00000522006 V9GYY5 206 aaPredicted RBP12.96□□□□□ -0.33
LAMA4-219ENST00000522006 IL16Q14005 1332 aa12.96□□□□□ -0.33
LAMA4-219ENST00000522006 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.34
LAMA4-219ENST00000522006 SPAG1Q07617 926 aa12.96□□□□□ -0.34
LAMA4-219ENST00000522006 ANKS4BQ8N8V4 417 aa12.96□□□□□ -0.34
LAMA4-219ENST00000522006 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
LAMA4-219ENST00000522006 CLCN1P35523 988 aa12.96□□□□□ -0.34
LAMA4-219ENST00000522006 NCOA1Q15788 1441 aa12.96□□□□□ -0.34
LAMA4-219ENST00000522006 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
LAMA4-219ENST00000522006 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-219ENST00000522006 PRPHP41219 470 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 GSTA5Q7RTV2 222 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 XRCC6P12956 609 aaKnown RBP eCLIP12.95□□□□□ -0.34
LAMA4-219ENST00000522006 ASIC1P78348 528 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 DHX58Q96C10 678 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 GJC1P36383 396 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 ADGRF5Q8IZF2 1346 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 PSMA7O14818 248 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-219ENST00000522006 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
LAMA4-219ENST00000522006 KRT83P78385 493 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ARID5AQ03989 594 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-219ENST00000522006 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC77Q9BR77 488 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 VPS18Q9P253 973 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 PDE1AP54750 535 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 PHACTR2O75167 634 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 CYP7A1P22680 504 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 USP37Q86T82 979 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ESR2Q92731 530 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ABCC5O15440 1437 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ZFYP08048 801 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-219ENST00000522006 CAPN2P17655 700 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 TYRO3Q06418 890 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 MEIS3Q99687 375 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
LAMA4-219ENST00000522006 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 KARSQ15046 597 aaKnown RBP12.93□□□□□ -0.34
LAMA4-219ENST00000522006 ZNF354CQ86Y25 554 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 ANXA1P04083 346 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
LAMA4-219ENST00000522006 UBXN1Q04323 297 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 KRT86O43790 486 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 TUBB4AP04350 444 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
LAMA4-219ENST00000522006 NAPAP54920 295 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 ZBTB9Q96C00 473 aa12.93□□□□□ -0.34
LAMA4-219ENST00000522006 EXOC5O00471 708 aa12.92□□□□□ -0.34
LAMA4-219ENST00000522006 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
LAMA4-219ENST00000522006 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms