RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 MSNP26038 577 aaKnown RBP15.85■□□□□ 0.13
NEFM-205ENST00000521540 CNPY2Q9Y2B0 182 aa15.85■□□□□ 0.13
NEFM-205ENST00000521540 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
NEFM-205ENST00000521540 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
NEFM-205ENST00000521540 MCM5P33992 734 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 IL15P40933 162 aaPredicted RBP15.84■□□□□ 0.13
NEFM-205ENST00000521540 FOXO4P98177 505 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 LMBR1LQ6UX01 489 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 FAM196AQ6ZSG2 479 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 SPEF2Q9C093 1822 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 TJP1Q07157 1748 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 NBPF26B4DH59 902 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 MCMDC2Q4G0Z9 681 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 NBPF10Q6P3W6 841 aaKnown RBP15.84■□□□□ 0.13
NEFM-205ENST00000521540 NBPF15Q8N660 670 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 TPCN1Q9ULQ1 816 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
NEFM-205ENST00000521540 ITGB4P16144 1822 aa15.83■□□□□ 0.13
NEFM-205ENST00000521540 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.12
NEFM-205ENST00000521540 LARP6Q9BRS8 491 aaKnown RBP15.83■□□□□ 0.12
NEFM-205ENST00000521540 CCDC39Q9UFE4 941 aa15.83■□□□□ 0.12
NEFM-205ENST00000521540 CIAO1O76071 339 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 ST3GAL1Q11201 340 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 LARP1BQ659C4 914 aaKnown RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 ZNF589Q86UQ0 364 aaPredicted RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 GDPD2Q9HCC8 539 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 HELLSQ9NRZ9 838 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 NOL7Q9UMY1 257 aaKnown RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 FOXD4L6Q3SYB3 417 aaPredicted RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 FOXD4L3Q6VB84 417 aaPredicted RBP15.82■□□□□ 0.12
NEFM-205ENST00000521540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
NEFM-205ENST00000521540 NEK1Q96PY6 1258 aa15.82■□□□□ 0.12
NEFM-205ENST00000521540 KAT6BQ8WYB5 2073 aa15.81■□□□□ 0.12
NEFM-205ENST00000521540 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
NEFM-205ENST00000521540 TEX13AQ9BXU3 409 aaPredicted RBP15.81■□□□□ 0.12
NEFM-205ENST00000521540 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
NEFM-205ENST00000521540 VPS37CA5D8V6 355 aaPredicted RBP15.8■□□□□ 0.12
NEFM-205ENST00000521540 EYA2O00167 538 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 KRT85P78386 507 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
NEFM-205ENST00000521540 LRRFIP1Q32MZ4 808 aaKnown RBP15.8■□□□□ 0.12
NEFM-205ENST00000521540 ATG9AQ7Z3C6 839 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
NEFM-205ENST00000521540 ELP1O95163 1332 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 ZNF609O15014 1411 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 NECAB1Q8N987 351 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 ACSBG1Q96GR2 724 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 NAP1L5Q96NT1 182 aaPredicted RBP15.8■□□□□ 0.12
NEFM-205ENST00000521540 CHMP3Q9Y3E7 222 aa15.8■□□□□ 0.12
NEFM-205ENST00000521540 TNS1Q9HBL0 1735 aaKnown RBP15.79■□□□□ 0.12
NEFM-205ENST00000521540 FIBPO43427 364 aa15.79■□□□□ 0.12
NEFM-205ENST00000521540 DSCC1Q9BVC3 393 aa15.79■□□□□ 0.12
NEFM-205ENST00000521540 PAG1Q9NWQ8 432 aa15.79■□□□□ 0.12
NEFM-205ENST00000521540 ZNF500O60304 480 aaPredicted RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 DNM1Q05193 864 aaKnown RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 ISCA1Q9BUE6 129 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 BTAF1O14981 1849 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 KCNQ2O43526 872 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 NEUROD6Q96NK8 337 aa15.78■□□□□ 0.12
NEFM-205ENST00000521540 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
NEFM-205ENST00000521540 A1BGP04217 495 aa15.77■□□□□ 0.11
NEFM-205ENST00000521540 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.11
NEFM-205ENST00000521540 GTF3C6Q969F1 213 aa15.77■□□□□ 0.11
NEFM-205ENST00000521540 LLPHQ9BRT6 129 aaKnown RBP15.77■□□□□ 0.11
NEFM-205ENST00000521540 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.11
NEFM-205ENST00000521540 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 ZMYM1Q5SVZ6 1142 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
NEFM-205ENST00000521540 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 SYTL4Q96C24 671 aaPredicted RBP15.76■□□□□ 0.11
NEFM-205ENST00000521540 PLA2G12BQ9BX93 195 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
NEFM-205ENST00000521540 AKAP2Q9Y2D5 859 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 OFD1O75665 1012 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 TRIM37O94972 964 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
NEFM-205ENST00000521540 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 CYP21A2P08686 494 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 IFIT1P09914 478 aaKnown RBP15.75■□□□□ 0.11
NEFM-205ENST00000521540 TERF1P54274 439 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 Q6ZUG5 572 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 PIGBQ92521 554 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 ZBTB3Q9H5J0 574 aa15.75■□□□□ 0.11
NEFM-205ENST00000521540 CEP126Q9P2H0 1117 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms