RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MINPP1Q9UNW1 487 aa26.07■■□□□ 1.76
TRIM35-203ENST00000521253 CHMP3Q9Y3E7 222 aa26.07■■□□□ 1.76
TRIM35-203ENST00000521253 GJA3Q9Y6H8 435 aa26.07■■□□□ 1.76
TRIM35-203ENST00000521253 ANKRD18BA2A2Z9 1011 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 RIMBP2O15034 1052 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 KAZALD1Q96I82 304 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 EYA3Q99504 573 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 XDHP47989 1333 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 KIF16BQ96L93 1317 aa26.06■■□□□ 1.76
TRIM35-203ENST00000521253 IQCA1LA6NCM1 817 aa26.05■■□□□ 1.76
TRIM35-203ENST00000521253 IFIT5Q13325 482 aaKnown RBP26.05■■□□□ 1.76
TRIM35-203ENST00000521253 USP44Q9H0E7 712 aa26.05■■□□□ 1.76
TRIM35-203ENST00000521253 BCAR3O75815 825 aa26.04■■□□□ 1.76
TRIM35-203ENST00000521253 CXCL9Q07325 125 aa26.04■■□□□ 1.76
TRIM35-203ENST00000521253 MPHOSPH8Q99549 860 aa26.04■■□□□ 1.76
TRIM35-203ENST00000521253 YDJCA8MPS7 323 aa26.03■■□□□ 1.76
TRIM35-203ENST00000521253 CCT4P50991 539 aaKnown RBP26.03■■□□□ 1.76
TRIM35-203ENST00000521253 ARHGAP45Q92619 1136 aa26.03■■□□□ 1.76
TRIM35-203ENST00000521253 ATP2B4P23634 1241 aa26.02■■□□□ 1.76
TRIM35-203ENST00000521253 ZC3H12CQ9C0D7 883 aaKnown RBP26.02■■□□□ 1.76
TRIM35-203ENST00000521253 TAF1DQ9H5J8 278 aaPredicted RBP26.02■■□□□ 1.76
TRIM35-203ENST00000521253 DBNDD1Q9H9R9 158 aa26.02■■□□□ 1.76
TRIM35-203ENST00000521253 HACL1Q9UJ83 578 aa26.02■■□□□ 1.76
TRIM35-203ENST00000521253 WTIPA6NIX2 430 aaPredicted RBP26.01■■□□□ 1.75
TRIM35-203ENST00000521253 RAD17O75943 681 aa26.01■■□□□ 1.75
TRIM35-203ENST00000521253 DOK7Q18PE1 504 aa26.01■■□□□ 1.75
TRIM35-203ENST00000521253 CCDC57Q2TAC2 916 aa26.01■■□□□ 1.75
TRIM35-203ENST00000521253 BICC1Q9H694 974 aaKnown RBP26.01■■□□□ 1.75
TRIM35-203ENST00000521253 FSTL1Q12841 308 aa26■■□□□ 1.75
TRIM35-203ENST00000521253 CIAPIN1Q6FI81 312 aa26■■□□□ 1.75
TRIM35-203ENST00000521253 CEP350Q5VT06 3117 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 ECE2O60344 883 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 POTEIP0CG38 1075 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 POTEJP0CG39 1038 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 SCNN1DP51172 638 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 RABL6Q3YEC7 729 aaPredicted RBP25.99■■□□□ 1.75
TRIM35-203ENST00000521253 ANKRD44Q8N8A2 993 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 SMC1BQ8NDV3 1235 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 FRAT1Q92837 279 aaPredicted RBP25.99■■□□□ 1.75
TRIM35-203ENST00000521253 ZNF594Q96JF6 807 aaPredicted RBP25.99■■□□□ 1.75
TRIM35-203ENST00000521253 SPEF2Q9C093 1822 aa25.99■■□□□ 1.75
TRIM35-203ENST00000521253 IPO8O15397 1037 aaKnown RBP25.98■■□□□ 1.75
TRIM35-203ENST00000521253 HSPA6P17066 643 aa25.98■■□□□ 1.75
TRIM35-203ENST00000521253 EPHX2P34913 555 aa25.98■■□□□ 1.75
TRIM35-203ENST00000521253 TAF7LQ5H9L4 462 aa25.98■■□□□ 1.75
TRIM35-203ENST00000521253 ANKRD2Q9GZV1 360 aa25.98■■□□□ 1.75
TRIM35-203ENST00000521253 SCN4AP35499 1836 aa25.98■■□□□ 1.75
TRIM35-203ENST00000521253 TRIM27P14373 513 aa25.97■■□□□ 1.75
TRIM35-203ENST00000521253 CHRNDQ07001 517 aa25.97■■□□□ 1.75
TRIM35-203ENST00000521253 TNIP1Q15025 636 aa25.97■■□□□ 1.75
TRIM35-203ENST00000521253 LMOD1P29536 600 aaPredicted RBP25.96■■□□□ 1.75
TRIM35-203ENST00000521253 ATF7IPQ6VMQ6 1270 aa25.96■■□□□ 1.75
TRIM35-203ENST00000521253 KCNQ5Q9NR82 932 aa25.96■■□□□ 1.75
TRIM35-203ENST00000521253 TNNQ9UQP3 1299 aa25.96■■□□□ 1.75
TRIM35-203ENST00000521253 LEMD3Q9Y2U8 911 aa25.96■■□□□ 1.75
TRIM35-203ENST00000521253 EPS15P42566 896 aa25.95■■□□□ 1.74
TRIM35-203ENST00000521253 GMPSP49915 693 aaPredicted RBP25.95■■□□□ 1.74
TRIM35-203ENST00000521253 INTS3Q68E01 1043 aaKnown RBP25.95■■□□□ 1.74
TRIM35-203ENST00000521253 LDHAL6AQ6ZMR3 332 aa25.95■■□□□ 1.74
TRIM35-203ENST00000521253 MED23Q9ULK4 1368 aa25.95■■□□□ 1.74
TRIM35-203ENST00000521253 ZNF804BA4D1E1 1349 aa25.94■■□□□ 1.74
TRIM35-203ENST00000521253 G3V3G9 751 aa25.94■■□□□ 1.74
TRIM35-203ENST00000521253 PSMD14O00487 310 aa25.94■■□□□ 1.74
TRIM35-203ENST00000521253 EAPPQ56P03 285 aaPredicted RBP25.94■■□□□ 1.74
TRIM35-203ENST00000521253 DCAF8Q5TAQ9 597 aa25.94■■□□□ 1.74
TRIM35-203ENST00000521253 UBTFL1P0CB47 393 aaPredicted RBP25.93■■□□□ 1.74
TRIM35-203ENST00000521253 CHADLQ6NUI6 762 aa25.93■■□□□ 1.74
TRIM35-203ENST00000521253 PNMA8AQ86V59 439 aaPredicted RBP25.93■■□□□ 1.74
TRIM35-203ENST00000521253 LDHDQ86WU2 507 aa25.93■■□□□ 1.74
TRIM35-203ENST00000521253 HELBQ8NG08 1087 aaPredicted RBP25.93■■□□□ 1.74
TRIM35-203ENST00000521253 CNNM1Q9NRU3 951 aa25.93■■□□□ 1.74
TRIM35-203ENST00000521253 GPRC5DQ9NZD1 345 aa25.93■■□□□ 1.74
TRIM35-203ENST00000521253 TAF5LO75529 589 aa25.92■■□□□ 1.74
TRIM35-203ENST00000521253 SNAP23O00161 211 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 KLRK1P26718 216 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 KCNJ4P48050 445 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 ZKSCAN2Q63HK3 967 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 TXNRD3Q86VQ6 643 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 CLUAP1Q96AJ1 413 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 MEIS3Q99687 375 aa25.91■■□□□ 1.74
TRIM35-203ENST00000521253 PUS3Q9BZE2 481 aaKnown RBP25.91■■□□□ 1.74
TRIM35-203ENST00000521253 ZBTB12Q9Y330 459 aaPredicted RBP25.91■■□□□ 1.74
TRIM35-203ENST00000521253 PODNQ7Z5L7 613 aa25.89■■□□□ 1.74
TRIM35-203ENST00000521253 CLEC11AQ9Y240 323 aa25.89■■□□□ 1.74
TRIM35-203ENST00000521253 ADARB2Q9NS39 739 aaKnown RBP25.88■■□□□ 1.73
TRIM35-203ENST00000521253 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
TRIM35-203ENST00000521253 SHTN1A0MZ66 631 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 PLIN1O60240 522 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 VIL1P09327 827 aaKnown RBP25.87■■□□□ 1.73
TRIM35-203ENST00000521253 APLP1P51693 650 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 USP50Q70EL3 339 aaPredicted RBP25.87■■□□□ 1.73
TRIM35-203ENST00000521253 KLHDC4Q8TBB5 520 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 DPF2Q92785 391 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 COA1Q9GZY4 146 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 CNOT7Q9UIV1 285 aaKnown RBP25.87■■□□□ 1.73
TRIM35-203ENST00000521253 RIPOR2Q9Y4F9 1068 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 SCN9AQ15858 1988 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 IRS2Q9Y4H2 1338 aa25.87■■□□□ 1.73
TRIM35-203ENST00000521253 HDAC5Q9UQL6 1122 aa25.86■■□□□ 1.73
TRIM35-203ENST00000521253 ADAMTSL1Q8N6G6 1762 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms