RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 ANP32EQ9BTT0 268 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 DBNLQ9UJU6 430 aaKnown RBP18.51■□□□□ 0.55
SREK1-209ENST00000520953 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
SREK1-209ENST00000520953 DBNDD2Q9BQY9 259 aa18.5■□□□□ 0.55
SREK1-209ENST00000520953 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
SREK1-209ENST00000520953 DDX46Q7L014 1031 aaKnown RBP18.49■□□□□ 0.55
SREK1-209ENST00000520953 ANKRD18AQ8IVF6 992 aa18.49■□□□□ 0.55
SREK1-209ENST00000520953 CDC5LQ99459 802 aaKnown RBP18.49■□□□□ 0.55
SREK1-209ENST00000520953 IFIT2P09913 472 aaKnown RBP18.49■□□□□ 0.55
SREK1-209ENST00000520953 ADORA1P30542 326 aa18.49■□□□□ 0.55
SREK1-209ENST00000520953 BRIP1Q9BX63 1249 aa18.49■□□□□ 0.55
SREK1-209ENST00000520953 CEP126Q9P2H0 1117 aa18.49■□□□□ 0.55
SREK1-209ENST00000520953 ZNF609O15014 1411 aa18.49■□□□□ 0.55
SREK1-209ENST00000520953 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
SREK1-209ENST00000520953 RPS8P62241 208 aaKnown RBP18.48■□□□□ 0.55
SREK1-209ENST00000520953 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 CHRNDQ07001 517 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 TTC22Q5TAA0 569 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 PI4K2BQ8TCG2 481 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 RPGRQ92834 1020 aaKnown RBP18.48■□□□□ 0.55
SREK1-209ENST00000520953 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
SREK1-209ENST00000520953 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
SREK1-209ENST00000520953 SLC16A10Q8TF71 515 aa18.47■□□□□ 0.55
SREK1-209ENST00000520953 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
SREK1-209ENST00000520953 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
SREK1-209ENST00000520953 CHRNA5P30532 468 aa18.46■□□□□ 0.55
SREK1-209ENST00000520953 ANP32AP39687 249 aaKnown RBP18.46■□□□□ 0.55
SREK1-209ENST00000520953 GRAPQ13588 217 aa18.46■□□□□ 0.55
SREK1-209ENST00000520953 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
SREK1-209ENST00000520953 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
SREK1-209ENST00000520953 BSDC1Q9NW68 430 aaPredicted RBP18.46■□□□□ 0.55
SREK1-209ENST00000520953 MINPP1Q9UNW1 487 aa18.46■□□□□ 0.55
SREK1-209ENST00000520953 PDE8BO95263 885 aa18.45■□□□□ 0.54
SREK1-209ENST00000520953 SRGNP10124 158 aa18.45■□□□□ 0.54
SREK1-209ENST00000520953 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
SREK1-209ENST00000520953 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
SREK1-209ENST00000520953 C8orf34Q49A92 452 aa18.45■□□□□ 0.54
SREK1-209ENST00000520953 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 OLFM4Q6UX06 510 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 HOXA10P31260 410 aaPredicted RBP18.44■□□□□ 0.54
SREK1-209ENST00000520953 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
SREK1-209ENST00000520953 MTFR1LQ9H019 292 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
SREK1-209ENST00000520953 SDSP20132 328 aa18.43■□□□□ 0.54
SREK1-209ENST00000520953 BMP2KLQ5H9B9 411 aa18.43■□□□□ 0.54
SREK1-209ENST00000520953 C2CD5Q86YS7 1000 aa18.43■□□□□ 0.54
SREK1-209ENST00000520953 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
SREK1-209ENST00000520953 FGFR2P21802 821 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 PDE6BP35913 854 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 UTRNP46939 3433 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 KLRK1P26718 216 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
SREK1-209ENST00000520953 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
SREK1-209ENST00000520953 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
SREK1-209ENST00000520953 ZNF622Q969S3 477 aaKnown RBP eCLIP18.41■□□□□ 0.546e-7■■□□□ 14.3
SREK1-209ENST00000520953 IPO9Q96P70 1041 aaKnown RBP18.41■□□□□ 0.54
SREK1-209ENST00000520953 CRAMP1Q96RY5 1269 aa18.41■□□□□ 0.54
SREK1-209ENST00000520953 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
SREK1-209ENST00000520953 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
SREK1-209ENST00000520953 NPR1P16066 1061 aa18.4■□□□□ 0.54
SREK1-209ENST00000520953 GPR101Q96P66 508 aaPredicted RBP18.4■□□□□ 0.54
SREK1-209ENST00000520953 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
SREK1-209ENST00000520953 SCARF1Q14162 830 aa18.4■□□□□ 0.54
SREK1-209ENST00000520953 SEC24BO95487 1268 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 PTGER2P43116 358 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 LPIN2Q92539 896 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 MASTLQ96GX5 879 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 AOX1Q06278 1338 aa18.39■□□□□ 0.53
SREK1-209ENST00000520953 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 H0YIN7 160 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 PHKA1P46020 1223 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 GPSM2P81274 684 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 PI16Q6UXB8 463 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
SREK1-209ENST00000520953 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
SREK1-209ENST00000520953 GPATCH3Q96I76 525 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
SREK1-209ENST00000520953 SLX4Q8IY92 1834 aa18.38■□□□□ 0.53
SREK1-209ENST00000520953 ATP5JP18859 108 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 ERICH6Q7L0X2 663 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 TXNRD3Q86VQ6 643 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 POLD1P28340 1107 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 GYG1P46976 350 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 BCAMP50895 628 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 ANKIB1Q9P2G1 1089 aa18.37■□□□□ 0.53
SREK1-209ENST00000520953 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
SREK1-209ENST00000520953 ERC2O15083 957 aa18.36■□□□□ 0.53
SREK1-209ENST00000520953 BBOX1O75936 387 aa18.36■□□□□ 0.53
SREK1-209ENST00000520953 SLC5A1P13866 664 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms