RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
CLK4-206ENST00000520878 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
CLK4-206ENST00000520878 ABCF2Q9UG63 623 aa13.46□□□□□ -0.25
CLK4-206ENST00000520878 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.25
CLK4-206ENST00000520878 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.25
CLK4-206ENST00000520878 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
CLK4-206ENST00000520878 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.25
CLK4-206ENST00000520878 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLK4-206ENST00000520878 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.26
CLK4-206ENST00000520878 PHF14O94880 888 aa13.46□□□□□ -0.26
CLK4-206ENST00000520878 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.26
CLK4-206ENST00000520878 SLC9C2Q5TAH2 1124 aa13.46□□□□□ -0.26
CLK4-206ENST00000520878 GPT2Q8TD30 523 aa13.46□□□□□ -0.26
CLK4-206ENST00000520878 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.26
CLK4-206ENST00000520878 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 F13A1P00488 732 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 ATG9AQ7Z3C6 839 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
CLK4-206ENST00000520878 CAMK4Q16566 473 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 NCOA3Q9Y6Q9 1424 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 VIRMAQ69YN4 1812 aaKnown RBP13.44□□□□□ -0.26
CLK4-206ENST00000520878 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
CLK4-206ENST00000520878 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
CLK4-206ENST00000520878 KRT85P78386 507 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
CLK4-206ENST00000520878 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 USP42Q9H9J4 1324 aaKnown RBP13.44□□□□□ -0.26
CLK4-206ENST00000520878 JAK2O60674 1132 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 CYP21A2P08686 494 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 FBXW7Q969H0 707 aa13.44□□□□□ -0.26
CLK4-206ENST00000520878 TOM1O60784 492 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
CLK4-206ENST00000520878 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
CLK4-206ENST00000520878 AIDAQ96BJ3 306 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
CLK4-206ENST00000520878 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
CLK4-206ENST00000520878 TTC14Q96N46 770 aa13.43□□□□□ -0.26
CLK4-206ENST00000520878 ZNF213O14771 459 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 EPB41L2O43491 1005 aaKnown RBP13.42□□□□□ -0.26
CLK4-206ENST00000520878 KCNQ2O43526 872 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 TM6SF1Q9BZW5 370 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
CLK4-206ENST00000520878 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
CLK4-206ENST00000520878 CTSWP56202 376 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 SPATA32Q96LK8 384 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
CLK4-206ENST00000520878 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 CTNNA3Q9UI47 895 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 LOC102724428A0A0B4J2F2 783 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 SIK1P57059 783 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
CLK4-206ENST00000520878 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
CLK4-206ENST00000520878 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 PDE8AO60658 829 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
CLK4-206ENST00000520878 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
CLK4-206ENST00000520878 CASP7P55210 303 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 CCDC144CPQ8IYA2 1237 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
CLK4-206ENST00000520878 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 SCARF1Q14162 830 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 HSPD1P10809 573 aaKnown RBP13.41□□□□□ -0.26
CLK4-206ENST00000520878 ZRSR1Q15695 479 aaKnown RBP13.41□□□□□ -0.26
CLK4-206ENST00000520878 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
CLK4-206ENST00000520878 DNTTIP2Q5QJE6 756 aaKnown RBP13.4□□□□□ -0.26
CLK4-206ENST00000520878 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
CLK4-206ENST00000520878 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 SLC5A1P13866 664 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 HELLSQ9NRZ9 838 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
CLK4-206ENST00000520878 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 RXRAP19793 462 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 PHKA1P46020 1223 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 FAM208AQ9UK61 1670 aaKnown RBP13.39□□□□□ -0.27
CLK4-206ENST00000520878 M0R2C6 588 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 GPAA1O43292 621 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 SLC4A9Q96Q91 983 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms