RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 JPH1Q9HDC5 661 aaPredicted RBP7.59□□□□□ -1.19
SQLE-204ENST00000520493 OPLAHO14841 1288 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 SASH3O75995 380 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 EGFRP00533 1210 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
SQLE-204ENST00000520493 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 FAM35AQ86V20 835 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 ETFBKMTQ8IXQ9 262 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 STIM2Q9P246 746 aa7.58□□□□□ -1.2
SQLE-204ENST00000520493 RGS9O75916 674 aaPredicted RBP7.57□□□□□ -1.2
SQLE-204ENST00000520493 FSTP19883 344 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
SQLE-204ENST00000520493 PSAPL1Q6NUJ1 521 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
SQLE-204ENST00000520493 FMR1NBQ8N0W7 255 aaPredicted RBP7.57□□□□□ -1.2
SQLE-204ENST00000520493 NUDT8Q8WV74 236 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 FNDC3AQ9Y2H6 1198 aaKnown RBP7.57□□□□□ -1.2
SQLE-204ENST00000520493 USP20Q9Y2K6 914 aa7.57□□□□□ -1.2
SQLE-204ENST00000520493 MED26O95402 600 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 PSAPP07602 524 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 CPB1P15086 417 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 NOS3P29474 1203 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 GPLD1P80108 840 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 ZFATQ9P243 1243 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
SQLE-204ENST00000520493 TNFRSF10BO14763 440 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 ZAP70P43403 619 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 NRLP54845 237 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 PLAURQ03405 335 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 ELMSAN1Q6PJG2 1045 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 MEGF10Q96KG7 1140 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 RBSNQ9H1K0 784 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 TLR7Q9NYK1 1049 aaKnown RBP7.55□□□□□ -1.2
SQLE-204ENST00000520493 FRRS1LQ9P0K9 344 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
SQLE-204ENST00000520493 UBAP1LF5GYI3 381 aa7.54□□□□□ -1.2
SQLE-204ENST00000520493 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
SQLE-204ENST00000520493 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
SQLE-204ENST00000520493 NAGPAQ9UK23 515 aa7.54□□□□□ -1.2
SQLE-204ENST00000520493 PCSK2P16519 638 aa7.53□□□□□ -1.2
SQLE-204ENST00000520493 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
SQLE-204ENST00000520493 MLLT1Q03111 559 aaPredicted RBP7.53□□□□□ -1.2
SQLE-204ENST00000520493 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
SQLE-204ENST00000520493 SEPT3Q9UH03 358 aa7.53□□□□□ -1.2
SQLE-204ENST00000520493 TMEM88BA6NKF7 163 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 GHRHP01286 108 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 RPLP1P05386 114 aaKnown RBP7.52□□□□□ -1.21
SQLE-204ENST00000520493 SOX18P35713 384 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 AFF1P51825 1210 aaKnown RBP7.52□□□□□ -1.21
SQLE-204ENST00000520493 B4GALNT3Q6L9W6 998 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 TTC16Q8NEE8 873 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
SQLE-204ENST00000520493 MMP20O60882 483 aa7.51□□□□□ -1.21
SQLE-204ENST00000520493 PERM1Q5SV97 790 aa7.51□□□□□ -1.21
SQLE-204ENST00000520493 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
SQLE-204ENST00000520493 TTC39BQ5VTQ0 682 aaPredicted RBP7.51□□□□□ -1.21
SQLE-204ENST00000520493 LPIN3Q9BQK8 851 aa7.51□□□□□ -1.21
SQLE-204ENST00000520493 ZBTB42B2RXF5 422 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 SSFA2P28290 1259 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
SQLE-204ENST00000520493 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 WFDC8Q8IUA0 241 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 TTC9Q92623 222 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
SQLE-204ENST00000520493 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
SQLE-204ENST00000520493 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
SQLE-204ENST00000520493 LOC102724428A0A0B4J2F2 783 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 KIAA1324LA8MWY0 1029 aaPredicted RBP7.49□□□□□ -1.21
SQLE-204ENST00000520493 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
SQLE-204ENST00000520493 SIK1P57059 783 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 NOM1Q5C9Z4 860 aaKnown RBP7.49□□□□□ -1.21
SQLE-204ENST00000520493 FAM26DQ5JW98 314 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 MSL1Q68DK7 614 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
SQLE-204ENST00000520493 SPACA7Q96KW9 195 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 ARID3AQ99856 593 aa7.49□□□□□ -1.21
SQLE-204ENST00000520493 ADAMTS4O75173 837 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 TGFB1P01137 390 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 HYAL2Q12891 473 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
SQLE-204ENST00000520493 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 DTWD1Q8N5C7 304 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 PLD4Q96BZ4 506 aa7.48□□□□□ -1.21
SQLE-204ENST00000520493 ZBTB39O15060 712 aa7.47□□□□□ -1.21
SQLE-204ENST00000520493 SCNN1AP37088 669 aa7.47□□□□□ -1.21
SQLE-204ENST00000520493 AAMPQ13685 434 aa7.47□□□□□ -1.21
SQLE-204ENST00000520493 OR13H1Q8NG92 308 aa7.47□□□□□ -1.21
SQLE-204ENST00000520493 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
SQLE-204ENST00000520493 ABI2Q9NYB9 513 aaPredicted RBP7.47□□□□□ -1.21
SQLE-204ENST00000520493 J3QW42 95 aa7.46□□□□□ -1.22
SQLE-204ENST00000520493 DNM1Q05193 864 aaKnown RBP7.46□□□□□ -1.22
SQLE-204ENST00000520493 PDE4CQ08493 712 aa7.46□□□□□ -1.22
SQLE-204ENST00000520493 OGFOD2Q6N063 350 aa7.46□□□□□ -1.22
SQLE-204ENST00000520493 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms