RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	KLHL34	Q8N239	644 aa		13.4	□□□□□ -0.26
CHTF8-206	ENST00000519534	GCC1	Q96CN9	775 aa		13.4	□□□□□ -0.26
CHTF8-206	ENST00000519534	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.4	□□□□□ -0.26
CHTF8-206	ENST00000519534	SURF6	O75683	361 aa	Known RBP	13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	ATG9A	Q7Z3C6	839 aa		13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	GPR108	Q9NPR9	543 aa		13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	CNNM1	Q9NRU3	951 aa		13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	LEMD3	Q9Y2U8	911 aa		13.39	□□□□□ -0.27
CHTF8-206	ENST00000519534	ZBTB22	O15209	634 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	GRIN3B	O60391	1043 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	IRX6	P78412	446 aa	Predicted RBP	13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	CCDC93	Q567U6	631 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	ZNF594	Q96JF6	807 aa	Predicted RBP	13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	PSMD1	Q99460	953 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	CEP126	Q9P2H0	1117 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	SRCAP	Q6ZRS2	3230 aa		13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	DDX60	Q8IY21	1712 aa	Known RBP	13.38	□□□□□ -0.27
CHTF8-206	ENST00000519534	PDE8B	O95263	885 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	ATP2B4	P23634	1241 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	CHRND	Q07001	517 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	UBE4A	Q14139	1066 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	C15orf52	Q6ZUT6	534 aa	Known RBP	13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	MPND	Q8N594	471 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	SUPT20H	Q8NEM7	779 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	BCS1L	Q9Y276	419 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	AKAP2	Q9Y2D5	859 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	LAMB2	P55268	1798 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	XDH	P47989	1333 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	LTBP3	Q9NS15	1303 aa		13.37	□□□□□ -0.27
CHTF8-206	ENST00000519534	C21orf2	O43822	256 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	LRRC24	Q50LG9	513 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	SMC5	Q8IY18	1101 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	VGLL2	Q8N8G2	317 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	KIF1BP	Q96EK5	621 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	PUS3	Q9BZE2	481 aa	Known RBP	13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	PA2G4	Q9UQ80	394 aa	Known RBP	13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	ANKRD31	Q8N7Z5	1873 aa		13.36	□□□□□ -0.27
CHTF8-206	ENST00000519534	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	METTL24	Q5JXM2	366 aa		13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	KLHDC4	Q8TBB5	520 aa		13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	PPP4R2	Q9NY27	417 aa		13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	ANKIB1	Q9P2G1	1089 aa		13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.35	□□□□□ -0.27
CHTF8-206	ENST00000519534	SASH1	O94885	1247 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	FGFR2	P21802	821 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	PUM3	Q15397	648 aa	Known RBP	13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	DPP8	Q6V1X1	898 aa	Predicted RBP	13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	LPIN2	Q92539	896 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	EYA3	Q99504	573 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	SIL1	Q9H173	461 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	GGA1	Q9UJY5	639 aa		13.34	□□□□□ -0.27
CHTF8-206	ENST00000519534	SNED1	Q8TER0	1413 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	IGHD	P01880	384 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	GPSM2	P81274	684 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	OS9	Q13438	667 aa	Predicted RBP	13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	TBC1D16	Q8TBP0	767 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	RHPN1	Q8TCX5	695 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	LRRCC1	Q9C099	1032 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	ZNF804B	A4D1E1	1349 aa		13.33	□□□□□ -0.28
CHTF8-206	ENST00000519534	GPR162	Q16538	588 aa		13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	CLASRP	Q8N2M8	674 aa	Known RBP	13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	TAOK3	Q9H2K8	898 aa		13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	POLL	Q9UGP5	575 aa		13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	EXOC6B	Q9Y2D4	811 aa		13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	KIAA1551	Q9HCM1	1747 aa		13.32	□□□□□ -0.28
CHTF8-206	ENST00000519534	IFIT1	P09914	478 aa	Known RBP	13.31	□□□□□ -0.28
CHTF8-206	ENST00000519534	KCNJ4	P48050	445 aa		13.31	□□□□□ -0.28
CHTF8-206	ENST00000519534	TFCP2	Q12800	502 aa		13.31	□□□□□ -0.28
CHTF8-206	ENST00000519534	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.31	□□□□□ -0.28
CHTF8-206	ENST00000519534	C6orf229	H3BNL8	230 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	TAF5L	O75529	589 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	SLC5A1	P13866	664 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	YBX3	P16989	372 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	KIAA2012	Q0VF49	1180 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	WASHC4	Q2M389	1173 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	PODN	Q7Z5L7	613 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	CCDC136	Q96JN2	1154 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	MYH3	P11055	1940 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	MED23	Q9ULK4	1368 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534	DLEC1	Q9Y238	1755 aa		13.3	□□□□□ -0.28
CHTF8-206	ENST00000519534		A0A1B0GUL7	405 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	NFKBIE	O00221	500 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	IGSF3	O75054	1194 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	UFL1	O94874	794 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	LMNB1	P20700	586 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	NUCB1	Q02818	461 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	ATP2B3	Q16720	1220 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	TNNI3K	Q59H18	835 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	CAVIN4	Q5BKX8	364 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	OLFM4	Q6UX06	510 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	ARHGAP27	Q6ZUM4	889 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	FBXO33	Q7Z6M2	555 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	HELB	Q8NG08	1087 aa	Predicted RBP	13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	COA1	Q9GZY4	146 aa		13.29	□□□□□ -0.28
CHTF8-206	ENST00000519534	FPGT-TNNI3K	V9GXZ4	949 aa		13.29	□□□□□ -0.28

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