RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 DNAAF4Q8WXU2 420 aa25.65■■□□□ 1.7
CHMP7-206ENST00000519529 ECE2O60344 883 aa25.64■■□□□ 1.7
CHMP7-206ENST00000519529 CDC5LQ99459 802 aaKnown RBP25.64■■□□□ 1.7
CHMP7-206ENST00000519529 ZC3H12CQ9C0D7 883 aaKnown RBP25.64■■□□□ 1.7
CHMP7-206ENST00000519529 PODXL2Q9NZ53 605 aa25.64■■□□□ 1.7
CHMP7-206ENST00000519529 GGA1Q9UJY5 639 aa25.64■■□□□ 1.7
CHMP7-206ENST00000519529 CNTNAP1P78357 1384 aa25.64■■□□□ 1.69
CHMP7-206ENST00000519529 G3V3G9 751 aa25.63■■□□□ 1.69
CHMP7-206ENST00000519529 PSMD14O00487 310 aa25.63■■□□□ 1.69
CHMP7-206ENST00000519529 DCAF8Q5TAQ9 597 aa25.63■■□□□ 1.69
CHMP7-206ENST00000519529 TTLL11Q8NHH1 800 aa25.63■■□□□ 1.69
CHMP7-206ENST00000519529 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
CHMP7-206ENST00000519529 ZBTB12Q9Y330 459 aaPredicted RBP25.63■■□□□ 1.69
CHMP7-206ENST00000519529 POLR2AP24928 1970 aaKnown RBP25.63■■□□□ 1.69
CHMP7-206ENST00000519529 H7C1W4 665 aa25.62■■□□□ 1.69
CHMP7-206ENST00000519529 HSPA1AP0DMV8 641 aaKnown RBP25.62■■□□□ 1.69
CHMP7-206ENST00000519529 HSPA1BP0DMV9 641 aaKnown RBP25.62■■□□□ 1.69
CHMP7-206ENST00000519529 GCKRQ14397 625 aa25.62■■□□□ 1.69
CHMP7-206ENST00000519529 IFFO2Q5TF58 517 aa25.62■■□□□ 1.69
CHMP7-206ENST00000519529 GREM2Q9H772 168 aa25.62■■□□□ 1.69
CHMP7-206ENST00000519529 H7C1D1 291 aa25.61■■□□□ 1.69
CHMP7-206ENST00000519529 FMR1Q06787 632 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHMP7-206ENST00000519529 PSME4Q14997 1843 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 SHTN1A0MZ66 631 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 MICALL2Q8IY33 904 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 LINS1Q8NG48 757 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 KCNQ5Q9NR82 932 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 ABT1Q9ULW3 272 aaKnown RBP25.6■■□□□ 1.69
CHMP7-206ENST00000519529 XDHP47989 1333 aa25.6■■□□□ 1.69
CHMP7-206ENST00000519529 TRAF5O00463 557 aa25.59■■□□□ 1.69
CHMP7-206ENST00000519529 TRPM4Q8TD43 1214 aa25.59■■□□□ 1.69
CHMP7-206ENST00000519529 VEGFBP49765 207 aa25.58■■□□□ 1.69
CHMP7-206ENST00000519529 RTL9Q8NET4 1388 aa25.57■■□□□ 1.68
CHMP7-206ENST00000519529 F6X3S4 739 aa25.57■■□□□ 1.68
CHMP7-206ENST00000519529 HIRAP54198 1017 aaPredicted RBP25.57■■□□□ 1.68
CHMP7-206ENST00000519529 DEFB115Q30KQ5 88 aa25.57■■□□□ 1.68
CHMP7-206ENST00000519529 DPF2Q92785 391 aa25.57■■□□□ 1.68
CHMP7-206ENST00000519529 BSDC1Q9NW68 430 aaPredicted RBP25.57■■□□□ 1.68
CHMP7-206ENST00000519529 ATP2B4P23634 1241 aa25.56■■□□□ 1.68
CHMP7-206ENST00000519529 RPS12P25398 132 aaKnown RBP25.55■■□□□ 1.68
CHMP7-206ENST00000519529 IGHMBP2P38935 993 aaKnown RBP25.55■■□□□ 1.68
CHMP7-206ENST00000519529 CASP7P55210 303 aa25.55■■□□□ 1.68
CHMP7-206ENST00000519529 SAMD7Q7Z3H4 446 aa25.55■■□□□ 1.68
CHMP7-206ENST00000519529 PLA2G12BQ9BX93 195 aa25.55■■□□□ 1.68
CHMP7-206ENST00000519529 GLIS2Q9BZE0 524 aaPredicted RBP25.55■■□□□ 1.68
CHMP7-206ENST00000519529 MINPP1Q9UNW1 487 aa25.55■■□□□ 1.68
CHMP7-206ENST00000519529 RASSF10A6NK89 507 aa25.54■■□□□ 1.68
CHMP7-206ENST00000519529 ITGA6P23229 1130 aa25.54■■□□□ 1.68
CHMP7-206ENST00000519529 COL13A1Q5TAT6 717 aaPredicted RBP25.54■■□□□ 1.68
CHMP7-206ENST00000519529 ZC3H15Q8WU90 426 aaKnown RBP25.54■■□□□ 1.68
CHMP7-206ENST00000519529 PGAP2Q9UHJ9 254 aa25.54■■□□□ 1.68
CHMP7-206ENST00000519529 FAM161AQ3B820 660 aa25.53■■□□□ 1.68
CHMP7-206ENST00000519529 TBC1D10BQ4KMP7 808 aaPredicted RBP25.53■■□□□ 1.68
CHMP7-206ENST00000519529 ZNF521Q96K83 1311 aa25.53■■□□□ 1.68
CHMP7-206ENST00000519529 WTIPA6NIX2 430 aaPredicted RBP25.52■■□□□ 1.68
CHMP7-206ENST00000519529 VIL1P09327 827 aaKnown RBP25.52■■□□□ 1.68
CHMP7-206ENST00000519529 BEND3Q5T5X7 828 aa25.52■■□□□ 1.68
CHMP7-206ENST00000519529 RBM26Q5T8P6 1007 aaKnown RBP25.52■■□□□ 1.68
CHMP7-206ENST00000519529 CST9Q5W186 159 aa25.52■■□□□ 1.68
CHMP7-206ENST00000519529 PAXIP1Q6ZW49 1069 aaPredicted RBP25.52■■□□□ 1.68
CHMP7-206ENST00000519529 MPHOSPH8Q99549 860 aa25.52■■□□□ 1.68
CHMP7-206ENST00000519529 CCT4P50991 539 aaKnown RBP25.51■■□□□ 1.67
CHMP7-206ENST00000519529 CELF2O95319 508 aaKnown RBP25.5■■□□□ 1.67
CHMP7-206ENST00000519529 CSF1RP07333 972 aa25.5■■□□□ 1.67
CHMP7-206ENST00000519529 CDC37L1Q7L3B6 337 aa25.5■■□□□ 1.67
CHMP7-206ENST00000519529 ZNF408Q9H9D4 720 aa25.5■■□□□ 1.67
CHMP7-206ENST00000519529 MED23Q9ULK4 1368 aa25.49■■□□□ 1.67
CHMP7-206ENST00000519529 WDR33Q9C0J8 1336 aaKnown RBP25.49■■□□□ 1.67
CHMP7-206ENST00000519529 EGFRP00533 1210 aa25.49■■□□□ 1.67
CHMP7-206ENST00000519529 SLC4A10Q6U841 1118 aa25.49■■□□□ 1.67
CHMP7-206ENST00000519529 CHMP3Q9Y3E7 222 aa25.49■■□□□ 1.67
CHMP7-206ENST00000519529 ANKRD18BA2A2Z9 1011 aa25.48■■□□□ 1.67
CHMP7-206ENST00000519529 GRM1Q13255 1194 aa25.48■■□□□ 1.67
CHMP7-206ENST00000519529 RSBN1LQ6PCB5 846 aaPredicted RBP25.48■■□□□ 1.67
CHMP7-206ENST00000519529 PODNQ7Z5L7 613 aa25.48■■□□□ 1.67
CHMP7-206ENST00000519529 A0A1B0GUL6 1792 aa25.48■■□□□ 1.67
CHMP7-206ENST00000519529 KIF4BQ2VIQ3 1234 aa25.47■■□□□ 1.67
CHMP7-206ENST00000519529 USP48Q86UV5 1035 aa25.47■■□□□ 1.67
CHMP7-206ENST00000519529 AIDAQ96BJ3 306 aa25.47■■□□□ 1.67
CHMP7-206ENST00000519529 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
CHMP7-206ENST00000519529 TLL2Q9Y6L7 1015 aa25.47■■□□□ 1.67
CHMP7-206ENST00000519529 USP17L3A6NCW0 530 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 USP17L4A6NCW7 530 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 FOXO4P98177 505 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 USP17L1Q7RTZ2 530 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 AGBL3Q8NEM8 1001 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 C9orf78Q9NZ63 289 aaPredicted RBP25.46■■□□□ 1.67
CHMP7-206ENST00000519529 LEMD3Q9Y2U8 911 aa25.46■■□□□ 1.67
CHMP7-206ENST00000519529 ZNF646O15015 1829 aaPredicted RBP25.45■■□□□ 1.66
CHMP7-206ENST00000519529 E9PSI1 815 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 GRM8O00222 908 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 FOXN1O15353 648 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 IFIT5Q13325 482 aaKnown RBP25.45■■□□□ 1.66
CHMP7-206ENST00000519529 CYP4F22Q6NT55 531 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 FBXW7Q969H0 707 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 DCPSQ96C86 337 aaKnown RBP25.45■■□□□ 1.66
CHMP7-206ENST00000519529 CAPNS2Q96L46 248 aa25.45■■□□□ 1.66
CHMP7-206ENST00000519529 ZNF804BA4D1E1 1349 aa25.44■■□□□ 1.66
CHMP7-206ENST00000519529 ECE1P42892 770 aa25.44■■□□□ 1.66
CHMP7-206ENST00000519529 KCNJ4P48050 445 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms