RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 RAD17O75943 681 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 MTHFSP49914 203 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 TBC1D10BQ4KMP7 808 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 ZNF530Q6P9A1 599 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 GUCD1Q96NT3 240 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 PIEZO1Q92508 2521 aa9.62□□□□□ -0.87
CTNNA1-216ENST00000519489 YDJCA8MPS7 323 aa9.61□□□□□ -0.87
CTNNA1-216ENST00000519489 UBE2Q2LH0YL09 131 aa9.61□□□□□ -0.87
CTNNA1-216ENST00000519489 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-216ENST00000519489 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
CTNNA1-216ENST00000519489 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
CTNNA1-216ENST00000519489 WASHC2AQ641Q2 1341 aa9.6□□□□□ -0.87
CTNNA1-216ENST00000519489 ZNF609O15014 1411 aa9.6□□□□□ -0.87
CTNNA1-216ENST00000519489 PPIP5K2O43314 1243 aa9.6□□□□□ -0.87
CTNNA1-216ENST00000519489 RAB3GAP2Q9H2M9 1393 aa9.6□□□□□ -0.87
CTNNA1-216ENST00000519489 TCERG1O14776 1098 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 EIF4A2Q14240 407 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 SPNS2Q8IVW8 549 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 BCL2L13Q9BXK5 485 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 LGR6Q9HBX8 967 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 PTCH2Q9Y6C5 1203 aa9.59□□□□□ -0.87
CTNNA1-216ENST00000519489 SYNGAP1Q96PV0 1343 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 A0A087WZG4 1122 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 NPHP1O15259 732 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 PPM1GO15355 546 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 ALDH1B1P30837 517 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 MAP3K12Q12852 859 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 SLC4A8Q2Y0W8 1093 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-216ENST00000519489 RPTORQ8N122 1335 aa9.57□□□□□ -0.88
CTNNA1-216ENST00000519489 PRAMEF22A3QJZ6 481 aa9.57□□□□□ -0.88
CTNNA1-216ENST00000519489 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-216ENST00000519489 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-216ENST00000519489 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
CTNNA1-216ENST00000519489 FAM177BA6PVY3 158 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 H7C1D1 291 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 A1BGP04217 495 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 BCAMP50895 628 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 PLEKHO1Q53GL0 409 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 SH3TC2Q8TF17 1288 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 DCPSQ96C86 337 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 GDF15Q99988 308 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 EFCC1Q9HA90 598 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 GGA3Q9NZ52 723 aa9.56□□□□□ -0.88
CTNNA1-216ENST00000519489 CDH23Q9H251 3354 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 TMEM265A0A087WTH1 108 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 MTFR1Q15390 333 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 KCNQ5Q9NR82 932 aa9.55□□□□□ -0.88
CTNNA1-216ENST00000519489 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 HOXA10P31260 410 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 RTFDC1Q9BY42 306 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 POLR2AP24928 1970 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-216ENST00000519489 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 PSMD14O00487 310 aa9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 IL6STP40189 918 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 FKBP1BP68106 108 aa9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 DPF2Q92785 391 aa9.53□□□□□ -0.88
CTNNA1-216ENST00000519489 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 PTPN12Q05209 780 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 KIAA2012Q0VF49 1180 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 CRHR2Q13324 411 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 TNIP1Q15025 636 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 SULF1Q8IWU6 871 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 FAM161BQ96MY7 647 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 NR2E3Q9Y5X4 410 aa9.52□□□□□ -0.89
CTNNA1-216ENST00000519489 PPP1R37O75864 691 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 STARD3NLO95772 234 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 BMP8BP34820 402 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 AMOTQ4VCS5 1084 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 864.4 ms