RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 FAM177BA6PVY3 158 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 TCIRG1Q13488 830 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 DOK7Q18PE1 504 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 NBPF5PQ86XG9 351 aaPredicted RBP8.95□□□□□ -0.98
MRPS28-205ENST00000519386 ZNF34Q8IZ26 560 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 CCDC24Q8N4L8 307 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 PI4KAP1Q8N8J0 262 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
MRPS28-205ENST00000519386 USP44Q9H0E7 712 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 C1orf115Q9H7X2 142 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 MAP3K2Q9Y2U5 619 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 ANKRD31Q8N7Z5 1873 aa8.95□□□□□ -0.98
MRPS28-205ENST00000519386 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 ATP8B2P98198 1209 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 NEXNQ0ZGT2 675 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 HSP90AB3PQ58FF7 597 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 PRR5LQ6MZQ0 368 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 CNBD1Q8NA66 436 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 NLGN2Q8NFZ4 835 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 SSH3Q8TE77 659 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 MYD88Q99836 296 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 SYT17Q9BSW7 474 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 CD2APQ9Y5K6 639 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 KIAA1551Q9HCM1 1747 aa8.94□□□□□ -0.98
MRPS28-205ENST00000519386 NPHP1O15259 732 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 PARP10Q53GL7 1025 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 HSP90AB4PQ58FF6 505 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 SUSD4Q5VX71 490 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 NLRP10Q86W26 655 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 TMC2Q8TDI7 906 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 ISCA1Q9BUE6 129 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 METTL22Q9BUU2 404 aaPredicted RBP8.93□□□□□ -0.98
MRPS28-205ENST00000519386 AOX1Q06278 1338 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
MRPS28-205ENST00000519386 RAB11FIP3O75154 756 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 NTSR2O95665 410 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 TPTE2Q6XPS3 522 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 PPP1R42Q7Z4L9 355 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 SKAP1Q86WV1 359 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 NUTM1Q86Y26 1132 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 MARVELD3Q96A59 401 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 DDRGK1Q96HY6 314 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 UTP14AQ9BVJ6 771 aaKnown RBP8.92□□□□□ -0.98
MRPS28-205ENST00000519386 LNPKQ9C0E8 428 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 NYXQ9GZU5 481 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
MRPS28-205ENST00000519386 UPF2Q9HAU5 1272 aaKnown RBP8.92□□□□□ -0.98
MRPS28-205ENST00000519386 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 A0A0G2JLW4 131 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 GRM8O00222 908 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 IGKV5-2P06315 115 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 DPEP1P16444 411 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 CHRNA5P30532 468 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 ST5P78524 1137 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 CWF19L2Q2TBE0 894 aaKnown RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 ANKRD45Q5TZF3 282 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 BRIP1Q9BX63 1249 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 TRMT112Q9UI30 125 aaKnown RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 WWC3Q9ULE0 1092 aa8.91□□□□□ -0.98
MRPS28-205ENST00000519386 LRRFIP2Q9Y608 721 aaKnown RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 COL11A2P13942 1736 aaPredicted RBP8.91□□□□□ -0.98
MRPS28-205ENST00000519386 BRCA1P38398 1863 aaKnown RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 SALL3Q9BXA9 1300 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 SPEF2Q9C093 1822 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 NEURL1BA8MQ27 555 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 RIMBP2O15034 1052 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 TGFB2P61812 414 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 RTL5Q5HYW3 569 aaPredicted RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 C2CD5Q86YS7 1000 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 CCDC191Q8NCU4 936 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 IPO9Q96P70 1041 aaKnown RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 LRRCC1Q9C099 1032 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 ZSWIM6Q9HCJ5 1215 aa8.9□□□□□ -0.98
MRPS28-205ENST00000519386 GPHNQ9NQX3 736 aaPredicted RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 CWC25Q9NXE8 425 aaPredicted RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 C9orf78Q9NZ63 289 aaPredicted RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
MRPS28-205ENST00000519386 RIC1Q4ADV7 1423 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 DLEC1Q9Y238 1755 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
MRPS28-205ENST00000519386 SH3TC1Q8TE82 1336 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 NBPF7P0C2Y1 421 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-205ENST00000519386 HCLS1P14317 486 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-205ENST00000519386 KCNA3P22001 575 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 PDE6BP35913 854 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 GCKRQ14397 625 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 TTC22Q5TAA0 569 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 ERC1Q8IUD2 1116 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 PLEKHM2Q8IWE5 1019 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 JARID2Q92833 1246 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-205ENST00000519386 FAM89AQ96GI7 184 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
MRPS28-205ENST00000519386 CACNA1SQ13698 1873 aa8.88□□□□□ -0.99
MRPS28-205ENST00000519386 PNMA6EA0A0J9YXQ4 647 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms