RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 RTCBQ9Y3I0 505 aaKnown RBP6.79□□□□□ -1.32
ATP6V1C1-204ENST00000518959 LINC01387J3KSC0 135 aa6.78□□□□□ -1.32
ATP6V1C1-204ENST00000518959 WISP1O95388 367 aa6.78□□□□□ -1.32
ATP6V1C1-204ENST00000518959 CD68P34810 354 aaPredicted RBP6.78□□□□□ -1.32
ATP6V1C1-204ENST00000518959 ABI1Q8IZP0 508 aa6.78□□□□□ -1.32
ATP6V1C1-204ENST00000518959 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
ATP6V1C1-204ENST00000518959 SART1O43290 800 aaKnown RBP6.77□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CMTR1Q8N1G2 835 aaKnown RBP6.77□□□□□ -1.33
ATP6V1C1-204ENST00000518959 GALNT11Q8NCW6 608 aa6.77□□□□□ -1.33
ATP6V1C1-204ENST00000518959 FAM46AQ96IP4 442 aaKnown RBP6.77□□□□□ -1.33
ATP6V1C1-204ENST00000518959 MYRFLQ96LU7 910 aa6.77□□□□□ -1.33
ATP6V1C1-204ENST00000518959 WDR64B1ANS9 1081 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 MMP20O60882 483 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 DKK1O94907 266 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 C8AP07357 584 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CDC25BP30305 580 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 TXNDC11Q6PKC3 985 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CLEC10AQ8IUN9 316 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 RGL4Q8IZJ4 473 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
ATP6V1C1-204ENST00000518959 IGFBP4P22692 258 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 BEND4Q6ZU67 534 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 ASIC4Q96FT7 647 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 FAM83CQ9BQN1 747 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 LACRTQ9GZZ8 138 aa6.75□□□□□ -1.33
ATP6V1C1-204ENST00000518959 EGFRP00533 1210 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 BMP3P12645 472 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 SOX18P35713 384 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 FAM20CQ8IXL6 584 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 KCNK4Q9NYG8 393 aa6.74□□□□□ -1.33
ATP6V1C1-204ENST00000518959 OPLAHO14841 1288 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 RAD21O60216 631 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 LARP1Q6PKG0 1096 aaKnown RBP6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 ADAMTS19Q8TE59 1207 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 UCN2Q96RP3 112 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 PIM2Q9P1W9 311 aa6.73□□□□□ -1.33
ATP6V1C1-204ENST00000518959 POM121CA8CG34 1229 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CDC27P30260 824 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 CEP135Q66GS9 1140 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 POU5F2Q8N7G0 328 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
ATP6V1C1-204ENST00000518959 FAM177BA6PVY3 158 aa6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 SMNDC1O75940 238 aaKnown RBP eCLIP6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 TP53INP2Q8IXH6 220 aa6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 KLHL23Q8NBE8 558 aa6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 KRTAP4-2Q9BYR5 136 aa6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 LEMD3Q9Y2U8 911 aa6.71□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FSCN2O14926 492 aa6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 DDX3YO15523 660 aaKnown RBP6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FBXL6Q8N531 539 aa6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 POM121Q96HA1 1249 aa6.7□□□□□ -1.34
ATP6V1C1-204ENST00000518959 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 ATP11AP98196 1134 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 DPYDQ12882 1025 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 ANKRD34AQ69YU3 496 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 NLRP13Q86W25 1043 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 UBASH3BQ8TF42 649 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATP6V1C1-204ENST00000518959 PREPP48147 710 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 HYAL2Q12891 473 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FDX2Q6P4F2 183 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 MYO19Q96H55 970 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 OSBPL1AQ9BXW6 950 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 CCDC39Q9UFE4 941 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 HIF3AQ9Y2N7 669 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 KCNMB2Q9Y691 235 aa6.68□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FOXO3O43524 673 aa6.67□□□□□ -1.34
ATP6V1C1-204ENST00000518959 SLC24A1O60721 1099 aa6.67□□□□□ -1.34
ATP6V1C1-204ENST00000518959 JUNBP17275 347 aaPredicted RBP6.67□□□□□ -1.34
ATP6V1C1-204ENST00000518959 RXRBP28702 533 aa6.67□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FOXD4L4Q8WXT5 416 aaPredicted RBP6.67□□□□□ -1.34
ATP6V1C1-204ENST00000518959 FOSL1P15407 271 aa6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 SCNN1AP37088 669 aa6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 VSIG10LQ86VR7 867 aa6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 KLHDC7BQ96G42 594 aa6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 TFIP11Q9UBB9 837 aaKnown RBP6.66□□□□□ -1.34
ATP6V1C1-204ENST00000518959 ADAM11O75078 769 aa6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 MAP4P27816 1152 aaKnown RBP6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 CRTC2Q53ET0 693 aaPredicted RBP6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 CBLL1Q75N03 491 aa6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 SH2B1Q9NRF2 756 aaPredicted RBP6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 LRFN2Q9ULH4 789 aa6.65□□□□□ -1.34
ATP6V1C1-204ENST00000518959 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms