RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-207ENST00000518716 KCNQ4P56696 695 aa8.65□□□□□ -1.02
PABPC1-207ENST00000518716 CBLBQ13191 982 aa8.65□□□□□ -1.02
PABPC1-207ENST00000518716 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-207ENST00000518716 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
PABPC1-207ENST00000518716 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
PABPC1-207ENST00000518716 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
PABPC1-207ENST00000518716 ANKRD36BQ8N2N9 1353 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 CELA2BP08218 269 aaPredicted RBP8.64□□□□□ -1.03
PABPC1-207ENST00000518716 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 CCDC116Q8IYX3 515 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 TFCP2L1Q9NZI6 479 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 CD2APQ9Y5K6 639 aa8.64□□□□□ -1.03
PABPC1-207ENST00000518716 LY75O60449 1722 aa8.63□□□□□ -1.03
PABPC1-207ENST00000518716 Q6ZVU0 165 aa8.63□□□□□ -1.03
PABPC1-207ENST00000518716 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-207ENST00000518716 KRI1Q8N9T8 703 aaKnown RBP8.63□□□□□ -1.03
PABPC1-207ENST00000518716 PSMG3-AS1Q96PY0 264 aa8.63□□□□□ -1.03
PABPC1-207ENST00000518716 MON2Q7Z3U7 1717 aa8.63□□□□□ -1.03
PABPC1-207ENST00000518716 CNTNAP5Q8WYK1 1306 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
PABPC1-207ENST00000518716 GAS6Q14393 721 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 NME9Q86XW9 330 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 DNAJC5GQ8N7S2 189 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 IP6K1Q92551 441 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 L3MBTL2Q969R5 705 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
PABPC1-207ENST00000518716 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-207ENST00000518716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.61□□□□□ -1.03
PABPC1-207ENST00000518716 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
PABPC1-207ENST00000518716 Q8N3U1 123 aa8.61□□□□□ -1.03
PABPC1-207ENST00000518716 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
PABPC1-207ENST00000518716 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-207ENST00000518716 LTN1O94822 1766 aa8.61□□□□□ -1.03
PABPC1-207ENST00000518716 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-207ENST00000518716 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-207ENST00000518716 CCNL1Q9UK58 526 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-207ENST00000518716 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
PABPC1-207ENST00000518716 AMIGO3Q86WK7 504 aa8.59□□□□□ -1.03
PABPC1-207ENST00000518716 FAM208AQ9UK61 1670 aaKnown RBP8.59□□□□□ -1.03
PABPC1-207ENST00000518716 K7ELQ4 463 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-207ENST00000518716 GJA5P36382 358 aa8.58□□□□□ -1.04
PABPC1-207ENST00000518716 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
PABPC1-207ENST00000518716 RSBN1LQ6PCB5 846 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-207ENST00000518716 ZCRB1Q8TBF4 217 aaKnown RBP8.58□□□□□ -1.04
PABPC1-207ENST00000518716 SLC12A5Q9H2X9 1139 aa8.58□□□□□ -1.04
PABPC1-207ENST00000518716 MEGF6O75095 1541 aa8.58□□□□□ -1.04
PABPC1-207ENST00000518716 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
PABPC1-207ENST00000518716 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
PABPC1-207ENST00000518716 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
PABPC1-207ENST00000518716 GALNT6Q8NCL4 622 aa8.57□□□□□ -1.04
PABPC1-207ENST00000518716 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
PABPC1-207ENST00000518716 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-207ENST00000518716 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
PABPC1-207ENST00000518716 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
PABPC1-207ENST00000518716 CUEDC1Q9NWM3 386 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-207ENST00000518716 MAP3K19Q56UN5 1328 aa8.56□□□□□ -1.04
PABPC1-207ENST00000518716 HOXC9P31274 260 aa8.56□□□□□ -1.04
PABPC1-207ENST00000518716 INSM2Q96T92 566 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-207ENST00000518716 ENAMQ9NRM1 1142 aa8.56□□□□□ -1.04
PABPC1-207ENST00000518716 CGNL1Q0VF96 1302 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 CICQ96RK0 1608 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-207ENST00000518716 TOGARAM1Q9Y4F4 1720 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 TAF1LQ8IZX4 1826 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 MAGEB6P1A0A0J9YX57 407 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-207ENST00000518716 FBLN1P23142 703 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-207ENST00000518716 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 A0A1W2PP64 1363 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
PABPC1-207ENST00000518716 USP47Q96K76 1375 aa8.55□□□□□ -1.04
PABPC1-207ENST00000518716 PCNTO95613 3336 aa8.54□□□□□ -1.04
PABPC1-207ENST00000518716 C5P01031 1676 aa8.54□□□□□ -1.04
PABPC1-207ENST00000518716 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
PABPC1-207ENST00000518716 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
PABPC1-207ENST00000518716 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-207ENST00000518716 JMYQ8N9B5 988 aa8.54□□□□□ -1.04
PABPC1-207ENST00000518716 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-207ENST00000518716 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
PABPC1-207ENST00000518716 RGPD2P0DJD1 1756 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 PALLDQ8WX93 1383 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 CYP27B1O15528 508 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 TOMM70O94826 608 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 RELBQ01201 579 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 SMIM5Q71RC9 77 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-207ENST00000518716 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
PABPC1-207ENST00000518716 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.04
PABPC1-207ENST00000518716 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms