RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 FBXO3Q9UK99 471 aa28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 IRX6P78412 446 aaPredicted RBP28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 LDHAL6AQ6ZMR3 332 aa28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 GRIN3BO60391 1043 aa28.49■■■□□ 2.15
NKX6-3-201ENST00000518699 RTKN2Q8IZC4 609 aa28.49■■■□□ 2.15
NKX6-3-201ENST00000518699 MINPP1Q9UNW1 487 aa28.49■■■□□ 2.15
NKX6-3-201ENST00000518699 LTBP3Q9NS15 1303 aa28.48■■■□□ 2.15
NKX6-3-201ENST00000518699 SIRT2Q8IXJ6 389 aa28.48■■■□□ 2.15
NKX6-3-201ENST00000518699 CNNM1Q9NRU3 951 aa28.48■■■□□ 2.15
NKX6-3-201ENST00000518699 SBF1O95248 1867 aa28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 EYA2O00167 538 aa28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 CIAO1O76071 339 aa28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 PUS3Q9BZE2 481 aaKnown RBP28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 PODXL2Q9NZ53 605 aa28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 RIPOR2Q9Y4F9 1068 aa28.47■■■□□ 2.15
NKX6-3-201ENST00000518699 NFKBIEO00221 500 aa28.46■■■□□ 2.15
NKX6-3-201ENST00000518699 HMMRO75330 724 aa28.46■■■□□ 2.15
NKX6-3-201ENST00000518699 PA2G4Q9UQ80 394 aaKnown RBP28.46■■■□□ 2.15
NKX6-3-201ENST00000518699 XDHP47989 1333 aa28.45■■■□□ 2.15
NKX6-3-201ENST00000518699 LRRC24Q50LG9 513 aa28.45■■■□□ 2.14
NKX6-3-201ENST00000518699 PSMD1Q99460 953 aa28.45■■■□□ 2.14
NKX6-3-201ENST00000518699 PCDHB15Q9Y5E8 787 aa28.45■■■□□ 2.14
NKX6-3-201ENST00000518699 GPSM2P81274 684 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 CHRNDQ07001 517 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 MPNDQ8N594 471 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 RTFDC1Q9BY42 306 aaPredicted RBP28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 ANKRD2Q9GZV1 360 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 TAOK3Q9H2K8 898 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 CCDC88AQ3V6T2 1871 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 MROH5Q6ZUA9 1318 aa28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 DICER1Q9UPY3 1922 aaKnown RBP28.44■■■□□ 2.14
NKX6-3-201ENST00000518699 DCAF8L1A6NGE4 600 aa28.43■■■□□ 2.14
NKX6-3-201ENST00000518699 FKBP4Q02790 459 aaKnown RBP eCLIP28.43■■■□□ 2.14
NKX6-3-201ENST00000518699 DPP8Q6V1X1 898 aaPredicted RBP28.43■■■□□ 2.14
NKX6-3-201ENST00000518699 ATG9AQ7Z3C6 839 aa28.43■■■□□ 2.14
NKX6-3-201ENST00000518699 SIL1Q9H173 461 aa28.43■■■□□ 2.14
NKX6-3-201ENST00000518699 NSFL1CQ9UNZ2 370 aaKnown RBP28.42■■■□□ 2.14
NKX6-3-201ENST00000518699 NOP58Q9Y2X3 529 aaKnown RBP28.42■■■□□ 2.14
NKX6-3-201ENST00000518699 IL15P40933 162 aaPredicted RBP28.41■■■□□ 2.14
NKX6-3-201ENST00000518699 ARHGAP27Q6ZUM4 889 aa28.41■■■□□ 2.14
NKX6-3-201ENST00000518699 ANKIB1Q9P2G1 1089 aa28.41■■■□□ 2.14
NKX6-3-201ENST00000518699 ARAP2Q8WZ64 1704 aa28.41■■■□□ 2.14
NKX6-3-201ENST00000518699 VGLL2Q8N8G2 317 aa28.4■■■□□ 2.14
NKX6-3-201ENST00000518699 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
NKX6-3-201ENST00000518699 RASSF7Q02833 373 aa28.39■■■□□ 2.14
NKX6-3-201ENST00000518699 TBC1D16Q8TBP0 767 aa28.39■■■□□ 2.14
NKX6-3-201ENST00000518699 GGA1Q9UJY5 639 aa28.39■■■□□ 2.14
NKX6-3-201ENST00000518699 TIAM2Q8IVF5 1701 aa28.39■■■□□ 2.14
NKX6-3-201ENST00000518699 ATP2B4P23634 1241 aa28.38■■■□□ 2.13
NKX6-3-201ENST00000518699 METTL24Q5JXM2 366 aa28.38■■■□□ 2.13
NKX6-3-201ENST00000518699 LEMD3Q9Y2U8 911 aa28.38■■■□□ 2.13
NKX6-3-201ENST00000518699 CHD4Q14839 1912 aa28.38■■■□□ 2.13
NKX6-3-201ENST00000518699 SURF6O75683 361 aaKnown RBP28.37■■■□□ 2.13
NKX6-3-201ENST00000518699 UFL1O94874 794 aa28.37■■■□□ 2.13
NKX6-3-201ENST00000518699 NEFLP07196 543 aa28.37■■■□□ 2.13
NKX6-3-201ENST00000518699 POLLQ9UGP5 575 aa28.37■■■□□ 2.13
NKX6-3-201ENST00000518699 G3BP1Q13283 466 aaKnown RBP eCLIP28.37■■■□□ 2.13
NKX6-3-201ENST00000518699 MED23Q9ULK4 1368 aa28.36■■■□□ 2.13
NKX6-3-201ENST00000518699 PDE8BO95263 885 aa28.36■■■□□ 2.13
NKX6-3-201ENST00000518699 HELBQ8NG08 1087 aaPredicted RBP28.36■■■□□ 2.13
NKX6-3-201ENST00000518699 VPS33BQ9H267 617 aa28.36■■■□□ 2.13
NKX6-3-201ENST00000518699 ZNF804BA4D1E1 1349 aa28.35■■■□□ 2.13
NKX6-3-201ENST00000518699 TAF5LO75529 589 aa28.35■■■□□ 2.13
NKX6-3-201ENST00000518699 HDAC1Q13547 482 aaPredicted RBP28.35■■■□□ 2.13
NKX6-3-201ENST00000518699 HSP90AB4PQ58FF6 505 aa28.35■■■□□ 2.13
NKX6-3-201ENST00000518699 COL4A5P29400 1685 aa28.34■■■□□ 2.13
NKX6-3-201ENST00000518699 PRELPP51888 382 aa28.34■■■□□ 2.13
NKX6-3-201ENST00000518699 EYA3Q99504 573 aa28.34■■■□□ 2.13
NKX6-3-201ENST00000518699 CEP126Q9P2H0 1117 aa28.34■■■□□ 2.13
NKX6-3-201ENST00000518699 EXOC6BQ9Y2D4 811 aa28.34■■■□□ 2.13
NKX6-3-201ENST00000518699 C6orf229H3BNL8 230 aa28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 SASH1O94885 1247 aa28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 LMNB1P20700 586 aa28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 IARSP41252 1262 aaKnown RBP28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 UBE4AQ14139 1066 aa28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 ERC1Q8IUD2 1116 aa28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 ZNF277Q9NRM2 450 aaPredicted RBP28.33■■■□□ 2.13
NKX6-3-201ENST00000518699 ZNF609O15014 1411 aa28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 IRS2Q9Y4H2 1338 aa28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 UTRNP46939 3433 aa28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 KCNJ4P48050 445 aa28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 KIAA2012Q0VF49 1180 aa28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 OS9Q13438 667 aaPredicted RBP28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 PUM3Q15397 648 aaKnown RBP28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 C15orf52Q6ZUT6 534 aaKnown RBP28.32■■■□□ 2.12
NKX6-3-201ENST00000518699 FGFR2P21802 821 aa28.31■■■□□ 2.12
NKX6-3-201ENST00000518699 DCTPP1Q9H773 170 aa28.31■■■□□ 2.12
NKX6-3-201ENST00000518699 WTIPA6NIX2 430 aaPredicted RBP28.3■■■□□ 2.12
NKX6-3-201ENST00000518699 TFCP2Q12800 502 aa28.3■■■□□ 2.12
NKX6-3-201ENST00000518699 WASHC4Q2M389 1173 aa28.3■■■□□ 2.12
NKX6-3-201ENST00000518699 SNAP23O00161 211 aa28.29■■■□□ 2.12
NKX6-3-201ENST00000518699 PPIP5K2O43314 1243 aa28.29■■■□□ 2.12
NKX6-3-201ENST00000518699 RAB11FIP3O75154 756 aa28.29■■■□□ 2.12
NKX6-3-201ENST00000518699 GPR101Q96P66 508 aaPredicted RBP28.29■■■□□ 2.12
NKX6-3-201ENST00000518699 PSME4Q14997 1843 aa28.28■■■□□ 2.12
NKX6-3-201ENST00000518699 AOC3Q16853 763 aa28.28■■■□□ 2.12
NKX6-3-201ENST00000518699 GPR108Q9NPR9 543 aa28.28■■■□□ 2.12
NKX6-3-201ENST00000518699 ATP2B3Q16720 1220 aa28.27■■■□□ 2.12
NKX6-3-201ENST00000518699 AKAP2Q9Y2D5 859 aa28.27■■■□□ 2.12
NKX6-3-201ENST00000518699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms