RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NEURL1BA8MQ27 555 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 CPNE3O75131 537 aaKnown RBP6.49□□□□□ -1.37
VPS13B-207ENST00000518569 PHACTR2O75167 634 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 KIF4AO95239 1232 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 ELOA3BQ3SY89 546 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 FCHSD1Q86WN1 690 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 NPAS4Q8IUM7 802 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 C1orf127Q8N9H9 656 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 ELOA3Q8NG57 546 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 UBE2OQ9C0C9 1292 aaKnown RBP6.49□□□□□ -1.37
VPS13B-207ENST00000518569 CHRDQ9H2X0 955 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
VPS13B-207ENST00000518569 OIP5O43482 229 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 ALAS2P22557 587 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 CES1P23141 567 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 FGD1P98174 961 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 HYAL2Q12891 473 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 RRAGCQ9HB90 399 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 DNAJB12Q9NXW2 375 aaKnown RBP6.48□□□□□ -1.37
VPS13B-207ENST00000518569 SALL4Q9UJQ4 1053 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 FOXD3Q9UJU5 478 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-207ENST00000518569 AMOTL2Q9Y2J4 779 aa6.48□□□□□ -1.37
VPS13B-207ENST00000518569 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
VPS13B-207ENST00000518569 EIF1AYO14602 144 aaKnown RBP6.47□□□□□ -1.37
VPS13B-207ENST00000518569 EPXP11678 715 aa6.47□□□□□ -1.37
VPS13B-207ENST00000518569 ADH7P40394 386 aa6.47□□□□□ -1.37
VPS13B-207ENST00000518569 ENOX2Q16206 610 aaKnown RBP6.47□□□□□ -1.37
VPS13B-207ENST00000518569 GALNT6Q8NCL4 622 aa6.47□□□□□ -1.37
VPS13B-207ENST00000518569 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
VPS13B-207ENST00000518569 LOC102724428A0A0B4J2F2 783 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 MSTNO14793 375 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-207ENST00000518569 EDN3P14138 238 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 SIK1P57059 783 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 ORC1Q13415 861 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 PLA2G4EQ3MJ16 856 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 EAPPQ56P03 285 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-207ENST00000518569 C1orf229Q6ZS94 237 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-207ENST00000518569 GALNT12Q8IXK2 581 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 RGS22Q8NE09 1264 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 DCAF5Q96JK2 942 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.38
VPS13B-207ENST00000518569 EREGO14944 169 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 P4HBP07237 508 aaKnown RBP6.45□□□□□ -1.38
VPS13B-207ENST00000518569 AMPD1P23109 780 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 ALG1LQ6GMV1 187 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 FBF1Q8TES7 1133 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 TTC9Q92623 222 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 SPACA7Q96KW9 195 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 RBSNQ9H1K0 784 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 IGFLR1Q9H665 355 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 FRRS1LQ9P0K9 344 aa6.45□□□□□ -1.38
VPS13B-207ENST00000518569 PNMA6FA0A0J9YX94 578 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 MAPK8P45983 427 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 TBC1D8BQ0IIM8 1120 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 COL13A1Q5TAT6 717 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-207ENST00000518569 FBXO33Q7Z6M2 555 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 FAM35AQ86V20 835 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 NCAPG2Q86XI2 1143 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 CEP120Q8N960 986 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 BTBD6Q96KE9 485 aa6.44□□□□□ -1.38
VPS13B-207ENST00000518569 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
VPS13B-207ENST00000518569 PRPF40AO75400 957 aaKnown RBP6.43□□□□□ -1.38
VPS13B-207ENST00000518569 GHRHP01286 108 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 USPL1Q5W0Q7 1092 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 CHSY3Q70JA7 882 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 CCDC74AQ96AQ1 378 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 KANSL3Q9P2N6 904 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 MKL2Q9ULH7 1088 aa6.43□□□□□ -1.38
VPS13B-207ENST00000518569 SHISA8B8ZZ34 492 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 J3QW42 95 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 LDHBP07195 334 aaKnown RBP6.42□□□□□ -1.38
VPS13B-207ENST00000518569 CPB1P15086 417 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 SNRPNP63162 240 aaKnown RBP6.42□□□□□ -1.38
VPS13B-207ENST00000518569 MLLT1Q03111 559 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-207ENST00000518569 KIAA0319Q5VV43 1072 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 ELMSAN1Q6PJG2 1045 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 C20orf204Q6ZNR8 217 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 FRMD6Q96NE9 622 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 SPOCK3Q9BQ16 436 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 PRDM6Q9NQX0 595 aa6.42□□□□□ -1.38
VPS13B-207ENST00000518569 EIF2AK2P19525 551 aaKnown RBP6.41□□□□□ -1.38
VPS13B-207ENST00000518569 PERM1Q5SV97 790 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 PEAR1Q5VY43 1037 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-207ENST00000518569 HFE2Q6ZVN8 426 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 CACTIN-AS1Q8N1I8 211 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 BCL2L13Q9BXK5 485 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 NAGPAQ9UK23 515 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
VPS13B-207ENST00000518569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-207ENST00000518569 A0A1W2PP55 124 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.38
VPS13B-207ENST00000518569 NFKBIEO00221 500 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 GIPC1O14908 333 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms