RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 POLLQ9UGP5 575 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 MINPP1Q9UNW1 487 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 COL4A5P29400 1685 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 XDHP47989 1333 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 KDM2BQ8NHM5 1336 aa27.61■■■□□ 2.01
VEGFA-217ENST00000518538 GLTPD2A6NH11 291 aa27.6■■■□□ 2.01
VEGFA-217ENST00000518538 KIAA2012Q0VF49 1180 aa27.6■■■□□ 2.01
VEGFA-217ENST00000518538 TMEM57Q8N5G2 664 aa27.6■■■□□ 2.01
VEGFA-217ENST00000518538 TBC1D16Q8TBP0 767 aa27.6■■■□□ 2.01
VEGFA-217ENST00000518538 C6orf229H3BNL8 230 aa27.59■■■□□ 2.01
VEGFA-217ENST00000518538 GNAI3P08754 354 aa27.59■■■□□ 2.01
VEGFA-217ENST00000518538 TAF7LQ5H9L4 462 aa27.59■■■□□ 2.01
VEGFA-217ENST00000518538 DPY19L2Q6NUT2 758 aa27.59■■■□□ 2.01
VEGFA-217ENST00000518538 GGA1Q9UJY5 639 aa27.59■■■□□ 2.01
VEGFA-217ENST00000518538 FZD9O00144 591 aa27.58■■■□□ 2.01
VEGFA-217ENST00000518538 UFL1O94874 794 aa27.58■■■□□ 2.01
VEGFA-217ENST00000518538 NIM1KQ8IY84 436 aa27.58■■■□□ 2.01
VEGFA-217ENST00000518538 EYA3Q99504 573 aa27.58■■■□□ 2.01
VEGFA-217ENST00000518538 WASHC4Q2M389 1173 aa27.57■■■□□ 2
VEGFA-217ENST00000518538 RLBP1P12271 317 aa27.56■■■□□ 2
VEGFA-217ENST00000518538 ATP2B4P23634 1241 aa27.56■■■□□ 2
VEGFA-217ENST00000518538 ZNF594Q96JF6 807 aaPredicted RBP27.56■■■□□ 2
VEGFA-217ENST00000518538 ANKRD2Q9GZV1 360 aa27.56■■■□□ 2
VEGFA-217ENST00000518538 LRRFIP2Q9Y608 721 aaKnown RBP27.56■■■□□ 2
VEGFA-217ENST00000518538 ZNF541Q9H0D2 1346 aa27.55■■■□□ 2
VEGFA-217ENST00000518538 MS4A1P11836 297 aa27.54■■■□□ 2
VEGFA-217ENST00000518538 CHRNDQ07001 517 aa27.54■■■□□ 2
VEGFA-217ENST00000518538 LDHAL6AQ6ZMR3 332 aa27.54■■■□□ 2
VEGFA-217ENST00000518538 EIF6P56537 245 aaKnown RBP27.53■■■□□ 2
VEGFA-217ENST00000518538 GPR101Q96P66 508 aaPredicted RBP27.53■■■□□ 2
VEGFA-217ENST00000518538 NMRK2Q9NPI5 230 aa27.53■■■□□ 2
VEGFA-217ENST00000518538 ZNRF3Q9ULT6 936 aa27.53■■■□□ 2
VEGFA-217ENST00000518538 RIMBP2O15034 1052 aa27.52■■■□□ 2
VEGFA-217ENST00000518538 DDNO94850 711 aaPredicted RBP27.52■■■□□ 2
VEGFA-217ENST00000518538 ITPRIPQ8IWB1 547 aa27.52■■■□□ 2
VEGFA-217ENST00000518538 ZC3H12CQ9C0D7 883 aaKnown RBP27.52■■■□□ 2
VEGFA-217ENST00000518538 CNNM1Q9NRU3 951 aa27.52■■■□□ 2
VEGFA-217ENST00000518538 LEMD3Q9Y2U8 911 aa27.52■■■□□ 2
VEGFA-217ENST00000518538 WDR90Q96KV7 1748 aa27.5■■□□□ 1.99
VEGFA-217ENST00000518538 PANK1Q8TE04 598 aa27.5■■□□□ 1.99
VEGFA-217ENST00000518538 GNAI2P04899 355 aa27.49■■□□□ 1.99
VEGFA-217ENST00000518538 RFX5P48382 616 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-217ENST00000518538 GPC2Q8N158 579 aa27.49■■□□□ 1.99
VEGFA-217ENST00000518538 RRAGCQ9HB90 399 aa27.49■■□□□ 1.99
VEGFA-217ENST00000518538 MED23Q9ULK4 1368 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 ZNF804BA4D1E1 1349 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 KIF3CO14782 793 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 PLIN1O60240 522 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-217ENST00000518538 PUS3Q9BZE2 481 aaKnown RBP27.48■■□□□ 1.99
VEGFA-217ENST00000518538 RIPOR2Q9Y4F9 1068 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 A0A1B0GUL6 1792 aa27.48■■□□□ 1.99
VEGFA-217ENST00000518538 WTIPA6NIX2 430 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-217ENST00000518538 HELBQ8NG08 1087 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-217ENST00000518538 L3MBTL3Q96JM7 780 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-217ENST00000518538 DBNDD1Q9H9R9 158 aa27.47■■□□□ 1.99
VEGFA-217ENST00000518538 YDJCA8MPS7 323 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 ZBTB7BO15156 539 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-217ENST00000518538 ECE2O60344 883 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 TAF5LO75529 589 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 KCNJ4P48050 445 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 MTX1Q13505 466 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 DOK7Q18PE1 504 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 KLHDC4Q8TBB5 520 aa27.46■■□□□ 1.99
VEGFA-217ENST00000518538 MROH5Q6ZUA9 1318 aa27.45■■□□□ 1.99
VEGFA-217ENST00000518538 VEGFAP15692 232 aaPredicted RBP27.45■■□□□ 1.98
VEGFA-217ENST00000518538 PTPN12Q05209 780 aaKnown RBP27.45■■□□□ 1.98
VEGFA-217ENST00000518538 CXCL9Q07325 125 aa27.45■■□□□ 1.98
VEGFA-217ENST00000518538 POTECB2RU33 542 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 G3V3G9 751 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 LRRC24Q50LG9 513 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 DCAF8Q5TAQ9 597 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 CIAPIN1Q6FI81 312 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 GJA3Q9Y6H8 435 aa27.44■■□□□ 1.98
VEGFA-217ENST00000518538 MVPQ14764 893 aaKnown RBP27.43■■□□□ 1.98
VEGFA-217ENST00000518538 FBXO3Q9UK99 471 aa27.43■■□□□ 1.98
VEGFA-217ENST00000518538 IQCA1LA6NCM1 817 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 EYA2O00167 538 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 SRGAP3O43295 1099 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 RAD17O75943 681 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 PDE3AQ14432 1141 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 TNIP1Q15025 636 aa27.42■■□□□ 1.98
VEGFA-217ENST00000518538 C15orf52Q6ZUT6 534 aaKnown RBP27.42■■□□□ 1.98
VEGFA-217ENST00000518538 SNAP23O00161 211 aa27.41■■□□□ 1.98
VEGFA-217ENST00000518538 KLRK1P26718 216 aa27.41■■□□□ 1.98
VEGFA-217ENST00000518538 METTL24Q5JXM2 366 aa27.41■■□□□ 1.98
VEGFA-217ENST00000518538 TXNRD3Q86VQ6 643 aa27.41■■□□□ 1.98
VEGFA-217ENST00000518538 UBE4AQ14139 1066 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 PODNQ7Z5L7 613 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 COA1Q9GZY4 146 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 COPRSQ9NQ92 184 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 DDX19BQ9UMR2 479 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 COG6Q9Y2V7 657 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 IRS2Q9Y4H2 1338 aa27.4■■□□□ 1.98
VEGFA-217ENST00000518538 CIAO1O76071 339 aa27.39■■□□□ 1.98
VEGFA-217ENST00000518538 C16orf71Q8IYS4 520 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-217ENST00000518538 VGLL2Q8N8G2 317 aa27.39■■□□□ 1.98
VEGFA-217ENST00000518538 SCN4AP35499 1836 aa27.39■■□□□ 1.97
VEGFA-217ENST00000518538 ATG9AQ7Z3C6 839 aa27.38■■□□□ 1.97
VEGFA-217ENST00000518538 SIL1Q9H173 461 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms