RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 ATP2B4P23634 1241 aa23.56■■□□□ 1.36
HOXA3-203ENST00000518451 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
HOXA3-203ENST00000518451 BEND3Q5T5X7 828 aa23.56■■□□□ 1.36
HOXA3-203ENST00000518451 MAP1SQ66K74 1059 aaPredicted RBP23.56■■□□□ 1.36
HOXA3-203ENST00000518451 PASKQ96RG2 1323 aa23.56■■□□□ 1.36
HOXA3-203ENST00000518451 LRRC37AA6NMS7 1700 aa23.56■■□□□ 1.36
HOXA3-203ENST00000518451 YDJCA8MPS7 323 aa23.55■■□□□ 1.36
HOXA3-203ENST00000518451 F6X3S4 739 aa23.55■■□□□ 1.36
HOXA3-203ENST00000518451 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
HOXA3-203ENST00000518451 DBNDD1Q9H9R9 158 aa23.55■■□□□ 1.36
HOXA3-203ENST00000518451 H7C1D1 291 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 ECE2O60344 883 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 CSF1RP07333 972 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 CASP7P55210 303 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 SLFN5Q08AF3 891 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 DOK7Q18PE1 504 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 DPF2Q92785 391 aa23.54■■□□□ 1.36
HOXA3-203ENST00000518451 TMEM88BA6NKF7 163 aa23.53■■□□□ 1.36
HOXA3-203ENST00000518451 RPS12P25398 132 aaKnown RBP23.53■■□□□ 1.36
HOXA3-203ENST00000518451 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
HOXA3-203ENST00000518451 CNOT7Q9UIV1 285 aaKnown RBP23.53■■□□□ 1.36
HOXA3-203ENST00000518451 MINPP1Q9UNW1 487 aa23.53■■□□□ 1.36
HOXA3-203ENST00000518451 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
HOXA3-203ENST00000518451 ALDH1L1O75891 902 aa23.52■■□□□ 1.36
HOXA3-203ENST00000518451 ITGA6P23229 1130 aa23.52■■□□□ 1.36
HOXA3-203ENST00000518451 SLC4A10Q6U841 1118 aa23.52■■□□□ 1.36
HOXA3-203ENST00000518451 C9orf78Q9NZ63 289 aaPredicted RBP23.52■■□□□ 1.36
HOXA3-203ENST00000518451 PSMD14O00487 310 aa23.51■■□□□ 1.35
HOXA3-203ENST00000518451 ZC3H15Q8WU90 426 aaKnown RBP23.51■■□□□ 1.35
HOXA3-203ENST00000518451 SRCIN1Q9C0H9 1055 aa23.51■■□□□ 1.35
HOXA3-203ENST00000518451 ANKRD2Q9GZV1 360 aa23.51■■□□□ 1.35
HOXA3-203ENST00000518451 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
HOXA3-203ENST00000518451 GRM8O00222 908 aa23.5■■□□□ 1.35
HOXA3-203ENST00000518451 GPR101Q96P66 508 aaPredicted RBP23.5■■□□□ 1.35
HOXA3-203ENST00000518451 IFIT5Q13325 482 aaKnown RBP23.49■■□□□ 1.35
HOXA3-203ENST00000518451 PODNQ7Z5L7 613 aa23.49■■□□□ 1.35
HOXA3-203ENST00000518451 MRPL50Q8N5N7 158 aaKnown RBP23.49■■□□□ 1.35
HOXA3-203ENST00000518451 LEMD3Q9Y2U8 911 aa23.49■■□□□ 1.35
HOXA3-203ENST00000518451 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
HOXA3-203ENST00000518451 FAM161AQ3B820 660 aa23.48■■□□□ 1.35
HOXA3-203ENST00000518451 MICALL2Q8IY33 904 aa23.48■■□□□ 1.35
HOXA3-203ENST00000518451 PGAP2Q9UHJ9 254 aa23.48■■□□□ 1.35
HOXA3-203ENST00000518451 ZBTB12Q9Y330 459 aaPredicted RBP23.48■■□□□ 1.35
HOXA3-203ENST00000518451 PTPRCP08575 1304 aa23.48■■□□□ 1.35
HOXA3-203ENST00000518451 COL4A1P02462 1669 aa23.48■■□□□ 1.35
HOXA3-203ENST00000518451 VIL1P09327 827 aaKnown RBP23.47■■□□□ 1.35
HOXA3-203ENST00000518451 FOXO4P98177 505 aa23.47■■□□□ 1.35
HOXA3-203ENST00000518451 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
HOXA3-203ENST00000518451 ADAMTSL1Q8N6G6 1762 aa23.47■■□□□ 1.35
HOXA3-203ENST00000518451 CT47B1P0C2W7 299 aaPredicted RBP23.46■■□□□ 1.35
HOXA3-203ENST00000518451 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
HOXA3-203ENST00000518451 CHMP3Q9Y3E7 222 aa23.46■■□□□ 1.35
HOXA3-203ENST00000518451 LTBP1Q14766 1721 aa23.45■■□□□ 1.34
HOXA3-203ENST00000518451 CCDC57Q2TAC2 916 aa23.45■■□□□ 1.34
HOXA3-203ENST00000518451 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
HOXA3-203ENST00000518451 TRMT2AQ8IZ69 625 aaKnown RBP23.45■■□□□ 1.34
HOXA3-203ENST00000518451 SSH1Q8WYL5 1049 aa23.45■■□□□ 1.34
HOXA3-203ENST00000518451 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
HOXA3-203ENST00000518451 MKRN1Q9UHC7 482 aaKnown RBP23.45■■□□□ 1.34
HOXA3-203ENST00000518451 MED23Q9ULK4 1368 aa23.44■■□□□ 1.34
HOXA3-203ENST00000518451 AGBL3Q8NEM8 1001 aa23.44■■□□□ 1.34
HOXA3-203ENST00000518451 ZNF804BA4D1E1 1349 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 USP17L3A6NCW0 530 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 USP17L4A6NCW7 530 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 KCNJ4P48050 445 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 HIRAP54198 1017 aaPredicted RBP23.43■■□□□ 1.34
HOXA3-203ENST00000518451 TAF7LQ5H9L4 462 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 CDC37L1Q7L3B6 337 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 USP17L1Q7RTZ2 530 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
HOXA3-203ENST00000518451 MYH3P11055 1940 aa23.42■■□□□ 1.34
HOXA3-203ENST00000518451 DEFB115Q30KQ5 88 aa23.42■■□□□ 1.34
HOXA3-203ENST00000518451 RSBN1LQ6PCB5 846 aaPredicted RBP23.42■■□□□ 1.34
HOXA3-203ENST00000518451 CNTNAP1P78357 1384 aa23.41■■□□□ 1.34
HOXA3-203ENST00000518451 CHRNDQ07001 517 aa23.41■■□□□ 1.34
HOXA3-203ENST00000518451 SAMD7Q7Z3H4 446 aa23.41■■□□□ 1.34
HOXA3-203ENST00000518451 TRPM4Q8TD43 1214 aa23.41■■□□□ 1.34
HOXA3-203ENST00000518451 ABT1Q9ULW3 272 aaKnown RBP23.41■■□□□ 1.34
HOXA3-203ENST00000518451 TBC1D10BQ4KMP7 808 aaPredicted RBP23.4■■□□□ 1.34
HOXA3-203ENST00000518451 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
HOXA3-203ENST00000518451 LDHAL6AQ6ZMR3 332 aa23.4■■□□□ 1.34
HOXA3-203ENST00000518451 SMC4Q9NTJ3 1288 aa23.4■■□□□ 1.34
HOXA3-203ENST00000518451 UTYO14607 1347 aa23.39■■□□□ 1.34
HOXA3-203ENST00000518451 SHTN1A0MZ66 631 aa23.39■■□□□ 1.33
HOXA3-203ENST00000518451 WTIPA6NIX2 430 aaPredicted RBP23.39■■□□□ 1.33
HOXA3-203ENST00000518451 RASSF10A6NK89 507 aa23.39■■□□□ 1.33
HOXA3-203ENST00000518451 EPHA10Q5JZY3 1008 aa23.39■■□□□ 1.33
HOXA3-203ENST00000518451 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
HOXA3-203ENST00000518451 DCPSQ96C86 337 aaKnown RBP23.39■■□□□ 1.33
HOXA3-203ENST00000518451 TRAF5O00463 557 aa23.38■■□□□ 1.33
HOXA3-203ENST00000518451 USP17L8P0C7I0 530 aa23.38■■□□□ 1.33
HOXA3-203ENST00000518451 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
HOXA3-203ENST00000518451 CNNM1Q9NRU3 951 aa23.38■■□□□ 1.33
HOXA3-203ENST00000518451 NBPF7P0C2Y1 421 aaPredicted RBP23.37■■□□□ 1.33
HOXA3-203ENST00000518451 VEGFBP49765 207 aa23.37■■□□□ 1.33
HOXA3-203ENST00000518451 MMP14P50281 582 aa23.37■■□□□ 1.33
HOXA3-203ENST00000518451 ZNF280AP59817 542 aaPredicted RBP23.37■■□□□ 1.33
HOXA3-203ENST00000518451 STRIP1Q5VSL9 837 aa23.37■■□□□ 1.33
HOXA3-203ENST00000518451 CST9Q5W186 159 aa23.37■■□□□ 1.33
HOXA3-203ENST00000518451 MYO3BQ8WXR4 1341 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms