RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SGSM2O43147 1006 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 CIAO1O76071 339 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 UVSSAQ2YD98 709 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 AK7Q96M32 723 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 NARFQ9UHQ1 456 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 ZNF652Q9Y2D9 606 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 BRD1O95696 1058 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 IL15P40933 162 aaPredicted RBP21.91■■□□□ 1.1
SDC2-202ENST00000518385 ANO2Q9NQ90 1003 aa21.91■■□□□ 1.1
SDC2-202ENST00000518385 CDHR2Q9BYE9 1310 aa21.9■■□□□ 1.1
SDC2-202ENST00000518385 NCLP19338 710 aaKnown RBP21.9■■□□□ 1.1
SDC2-202ENST00000518385 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
SDC2-202ENST00000518385 SMIM5Q71RC9 77 aa21.9■■□□□ 1.1
SDC2-202ENST00000518385 RBSNQ9H1K0 784 aa21.9■■□□□ 1.1
SDC2-202ENST00000518385 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
SDC2-202ENST00000518385 PRPF40AO75400 957 aaKnown RBP21.89■■□□□ 1.09
SDC2-202ENST00000518385 PARP10Q53GL7 1025 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 AMIGO3Q86WK7 504 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 KLHDC4Q8TBB5 520 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.09
SDC2-202ENST00000518385 FAM89AQ96GI7 184 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 UBN2Q6ZU65 1347 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
SDC2-202ENST00000518385 EP400Q96L91 3159 aa21.88■■□□□ 1.09
SDC2-202ENST00000518385 LETM1O95202 739 aaPredicted RBP21.88■■□□□ 1.09
SDC2-202ENST00000518385 ATP5JP18859 108 aa21.88■■□□□ 1.09
SDC2-202ENST00000518385 TRAPPC3LQ5T215 181 aa21.88■■□□□ 1.09
SDC2-202ENST00000518385 CCDC8Q9H0W5 538 aaPredicted RBP21.88■■□□□ 1.09
SDC2-202ENST00000518385 ADRA2BP18089 450 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 TFCP2Q12800 502 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 GPT2Q8TD30 523 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 BCL2L12Q9HB09 334 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
SDC2-202ENST00000518385 ZDHHC9Q9Y397 364 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 RAD50Q92878 1312 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 DYNC1I1O14576 645 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 ZPR1O75312 459 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
SDC2-202ENST00000518385 ILDR1Q86SU0 546 aaPredicted RBP21.87■■□□□ 1.09
SDC2-202ENST00000518385 NIP7Q9Y221 180 aaKnown RBP eCLIP21.87■■□□□ 1.09
SDC2-202ENST00000518385 RFX7Q2KHR2 1363 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 TNS1Q9HBL0 1735 aaKnown RBP21.86■■□□□ 1.09
SDC2-202ENST00000518385 EYA2O00167 538 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 MAP4K4O95819 1239 aaPredicted RBP21.86■■□□□ 1.09
SDC2-202ENST00000518385 CSF1RP07333 972 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 HSPA4P34932 840 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 SNRKQ9NRH2 765 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
SDC2-202ENST00000518385 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
SDC2-202ENST00000518385 ATG9AQ7Z3C6 839 aa21.85■■□□□ 1.09
SDC2-202ENST00000518385 TMX3Q96JJ7 454 aa21.85■■□□□ 1.09
SDC2-202ENST00000518385 UTP14AQ9BVJ6 771 aaKnown RBP21.85■■□□□ 1.09
SDC2-202ENST00000518385 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
SDC2-202ENST00000518385 WDR33Q9C0J8 1336 aaKnown RBP21.84■■□□□ 1.09
SDC2-202ENST00000518385 RFC4P35249 363 aa21.84■■□□□ 1.09
SDC2-202ENST00000518385 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
SDC2-202ENST00000518385 TMEM87AQ8NBN3 555 aa21.84■■□□□ 1.09
SDC2-202ENST00000518385 TSPY26PQ9H489 355 aa21.84■■□□□ 1.09
SDC2-202ENST00000518385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.84■■□□□ 1.09
SDC2-202ENST00000518385 PDIA4P13667 645 aaKnown RBP21.83■■□□□ 1.09
SDC2-202ENST00000518385 LSG1Q9H089 658 aaKnown RBP21.83■■□□□ 1.09
SDC2-202ENST00000518385 SCN7AQ01118 1682 aa21.83■■□□□ 1.09
SDC2-202ENST00000518385 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.09
SDC2-202ENST00000518385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 IRS4O14654 1257 aaPredicted RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 ZGPATQ8N5A5 531 aaKnown RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 DBNLQ9UJU6 430 aaKnown RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
SDC2-202ENST00000518385 NEK4P51957 841 aa21.82■■□□□ 1.08
SDC2-202ENST00000518385 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
SDC2-202ENST00000518385 SASS6Q6UVJ0 657 aa21.82■■□□□ 1.08
SDC2-202ENST00000518385 CWC27Q6UX04 472 aaKnown RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
SDC2-202ENST00000518385 TMEM63CQ9P1W3 806 aa21.82■■□□□ 1.08
SDC2-202ENST00000518385 RGPD3A6NKT7 1758 aaPredicted RBP21.81■■□□□ 1.08
SDC2-202ENST00000518385 RGPD4Q7Z3J3 1758 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 PDE8AO60658 829 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 NTSR2O95665 410 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 AKT1S1Q96B36 256 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 BOLA2Q9H3K6 86 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 AKAP2Q9Y2D5 859 aa21.81■■□□□ 1.08
SDC2-202ENST00000518385 HSP90B1P14625 803 aaKnown RBP21.8■■□□□ 1.08
SDC2-202ENST00000518385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.8■■□□□ 1.08
SDC2-202ENST00000518385 HAUS7Q99871 368 aa21.8■■□□□ 1.08
SDC2-202ENST00000518385 C4AP0C0L4 1744 aa21.8■■□□□ 1.08
SDC2-202ENST00000518385 IFIT5Q13325 482 aaKnown RBP21.79■■□□□ 1.08
SDC2-202ENST00000518385 CEP126Q9P2H0 1117 aa21.79■■□□□ 1.08
SDC2-202ENST00000518385 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 PKP1Q13835 747 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 KCNB2Q92953 911 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 SETDB2Q96T68 719 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 FSD1Q9BTV5 496 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 CTSWP56202 376 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 IL25Q9H293 177 aa21.78■■□□□ 1.08
SDC2-202ENST00000518385 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.78■■□□□ 1.08
SDC2-202ENST00000518385 ATP6V1DQ9Y5K8 247 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms