RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PDE4DQ08499 809 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 ASAP1Q9ULH1 1129 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 TNS1Q9HBL0 1735 aaKnown RBP8.08□□□□□ -1.12
MRPS28-203ENST00000518371 PALLDQ8WX93 1383 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 COL3A1P02461 1466 aaPredicted RBP8.07□□□□□ -1.12
MRPS28-203ENST00000518371 ANP32CO43423 234 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
MRPS28-203ENST00000518371 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
MRPS28-203ENST00000518371 PRR7Q8TB68 274 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
MRPS28-203ENST00000518371 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 TFCP2L1Q9NZI6 479 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 SBF2Q86WG5 1849 aa8.07□□□□□ -1.12
MRPS28-203ENST00000518371 MAPK8IP3Q9UPT6 1336 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 NHSQ6T4R5 1651 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 SPTLC1O15269 473 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
MRPS28-203ENST00000518371 SIK1P57059 783 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 TEFQ10587 303 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 MTMR2Q13614 643 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 IL17REQ8NFR9 667 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 SLC52A2Q9HAB3 445 aa8.06□□□□□ -1.12
MRPS28-203ENST00000518371 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 SIAH2O43255 324 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 CCNYL3P0C7X3 344 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 ZNF827Q17R98 1081 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 EVA1BQ9NVM1 165 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 MAP3K5Q99683 1374 aa8.05□□□□□ -1.12
MRPS28-203ENST00000518371 KDM6AO15550 1401 aaPredicted RBP8.04□□□□□ -1.12
MRPS28-203ENST00000518371 PKD1L3Q7Z443 1732 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 SHANK3Q9BYB0 1731 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 CFAP99D6REC4 459 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 ZBTB7AO95365 584 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 SH3BP2P78314 561 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 PTPRNQ16849 979 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 TTC5Q8N0Z6 440 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 PDGFDQ9GZP0 370 aaPredicted RBP8.04□□□□□ -1.12
MRPS28-203ENST00000518371 SPON1Q9HCB6 807 aa8.04□□□□□ -1.12
MRPS28-203ENST00000518371 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 BTAF1O14981 1849 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 EP400Q96L91 3159 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 HTATSF1O43719 755 aaKnown RBP8.03□□□□□ -1.12
MRPS28-203ENST00000518371 DCTN1Q14203 1278 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 MCM10Q7L590 875 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 RIC3Q7Z5B4 369 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 FLAD1Q8NFF5 587 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 PLEKHF1Q96S99 279 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 UNC93B1Q9H1C4 597 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 PPP1R1BQ9UD71 204 aaPredicted RBP8.03□□□□□ -1.12
MRPS28-203ENST00000518371 ADAMTS8Q9UP79 889 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
MRPS28-203ENST00000518371 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 RIPK4P57078 832 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 ITPK1Q13572 414 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 NEUROD2Q15784 382 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 CSPP1Q1MSJ5 1256 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 LINC00116Q8NCU8 138 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 BAP1Q92560 729 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 SLC4A9Q96Q91 983 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 PNPLA7Q6ZV29 1317 aa8.02□□□□□ -1.13
MRPS28-203ENST00000518371 TAF7Q15545 349 aaPredicted RBP8.01□□□□□ -1.13
MRPS28-203ENST00000518371 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 XP32Q5T750 250 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
MRPS28-203ENST00000518371 RUNDC1Q96C34 613 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 MTFR1LQ9H019 292 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 RREB1Q92766 1687 aa8.01□□□□□ -1.13
MRPS28-203ENST00000518371 NUP188Q5SRE5 1749 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 RGPD3A6NKT7 1758 aaPredicted RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 RGPD4Q7Z3J3 1758 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 POLD1P28340 1107 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 TMPOP42166 694 aaKnown RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 CCDC184Q52MB2 194 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 MYSM1Q5VVJ2 828 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 ZNF790Q6PG37 636 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 LYPD8Q6UX82 237 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 SMIM5Q71RC9 77 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 DNAJC10Q8IXB1 793 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
MRPS28-203ENST00000518371 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 RTCBQ9Y3I0 505 aaKnown RBP8□□□□□ -1.13
MRPS28-203ENST00000518371 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 RNF225M0QZC1 329 aaPredicted RBP7.99□□□□□ -1.13
MRPS28-203ENST00000518371 KCNQ3O43525 872 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms