RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 SECISBP2LQ93073 1101 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-211ENST00000518265 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 MVPQ14764 893 aaKnown RBP10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 HYPKQ9NX55 129 aa10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 PTPRCP08575 1304 aa10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 SOS1Q07889 1333 aaPredicted RBP10.04□□□□□ -0.8
SRGAP3-211ENST00000518265 STARD3NLO95772 234 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 EPAS1Q99814 870 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 MYD88Q99836 296 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 API5Q9BZZ5 524 aaKnown RBP10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 TAF1P21675 1872 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 G3V3G9 751 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 HLFQ16534 295 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 MEIS3Q99687 375 aa10.03□□□□□ -0.8
SRGAP3-211ENST00000518265 UNCXA6NJT0 531 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 GPR37L1O60883 481 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 TXNRD1Q16881 649 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 RSBN1LQ6PCB5 846 aaPredicted RBP10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 ANKRD13DQ6ZTN6 518 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 SND1Q7KZF4 910 aaKnown RBP eCLIP10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 SKAP1Q86WV1 359 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 PSMD1Q99460 953 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 PCDHB15Q9Y5E8 787 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 MYH3P11055 1940 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 SPEF2Q9C093 1822 aa10.02□□□□□ -0.81
SRGAP3-211ENST00000518265 GOLGB1Q14789 3259 aaKnown RBP10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 MOXD2PA6NHM9 499 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 SPTLC1O15269 473 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 TEX13AQ9BXU3 409 aaPredicted RBP10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 PRDM10Q9NQV6 1147 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 FAM177BA6PVY3 158 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 GPTP24298 496 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 ATN1P54259 1190 aaPredicted RBP10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 DIXDC1Q155Q3 683 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 SRP68Q9UHB9 627 aaKnown RBP10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
SRGAP3-211ENST00000518265 COL15A1P39059 1388 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 RGPD3A6NKT7 1758 aaPredicted RBP10□□□□□ -0.81
SRGAP3-211ENST00000518265 RGPD4Q7Z3J3 1758 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
SRGAP3-211ENST00000518265 IGKV5-2P06315 115 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 NDUFV2P19404 249 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 ZNF827Q17R98 1081 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 BEND3Q5T5X7 828 aa10□□□□□ -0.81
SRGAP3-211ENST00000518265 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
SRGAP3-211ENST00000518265 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
SRGAP3-211ENST00000518265 DDX58O95786 925 aaKnown RBP9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 NBPF7P0C2Y1 421 aaPredicted RBP9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 EIF5P55010 431 aaKnown RBP9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 PLBD2Q8NHP8 589 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 CHMP4BQ9H444 224 aaKnown RBP9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
SRGAP3-211ENST00000518265 SOCS7O14512 581 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 LILRB3O75022 631 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 IGHDP01880 384 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 CERS3Q8IU89 383 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 SYNE4Q8N205 404 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 METTL22Q9BUU2 404 aaPredicted RBP9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 LAMB2P55268 1798 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 DDX60Q8IY21 1712 aaKnown RBP9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 VAC14Q08AM6 782 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 PLCD4Q9BRC7 762 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 USP44Q9H0E7 712 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 PRM3Q9NNZ6 103 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 HMX1Q9NP08 348 aaPredicted RBP9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 ZBTB40Q9NUA8 1239 aa9.98□□□□□ -0.81
SRGAP3-211ENST00000518265 MAP3K15Q6ZN16 1313 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 CNTNAP4Q9C0A0 1308 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 CCT4P50991 539 aaKnown RBP9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 POTEHQ6S545 545 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 LRRFIP2Q9Y608 721 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms