RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
CPEB4-203ENST00000517880 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 KCNQ2O43526 872 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
CPEB4-203ENST00000517880 ITGA6P23229 1130 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 PSMA5P28066 241 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 MCM4P33991 863 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 TIMM10P62072 90 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
CPEB4-203ENST00000517880 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 ZNF512BQ96KM6 892 aaPredicted RBP12.92□□□□□ -0.34
CPEB4-203ENST00000517880 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
CPEB4-203ENST00000517880 HELLSQ9NRZ9 838 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
CPEB4-203ENST00000517880 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
CPEB4-203ENST00000517880 IFIT1P09914 478 aaKnown RBP12.91□□□□□ -0.34
CPEB4-203ENST00000517880 KCNJ4P48050 445 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 SUSD4Q5VX71 490 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
CPEB4-203ENST00000517880 PAG1Q9NWQ8 432 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 RTL9Q8NET4 1388 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 MED23Q9ULK4 1368 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
CPEB4-203ENST00000517880 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
CPEB4-203ENST00000517880 SSFA2P28290 1259 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 PTH1RQ03431 593 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 METTL24Q5JXM2 366 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 DNAJC2Q99543 621 aaKnown RBP12.9□□□□□ -0.34
CPEB4-203ENST00000517880 GREM2Q9H772 168 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
CPEB4-203ENST00000517880 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
CPEB4-203ENST00000517880 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 KRT32Q14532 448 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 TNPO1Q92973 898 aaKnown RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
CPEB4-203ENST00000517880 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
CPEB4-203ENST00000517880 TAF5LO75529 589 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
CPEB4-203ENST00000517880 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 TTC14Q96N46 770 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPEB4-203ENST00000517880 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 GOLIM4O00461 696 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 SLC27A2O14975 620 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
CPEB4-203ENST00000517880 PDE8BO95263 885 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 NTSR2O95665 410 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
CPEB4-203ENST00000517880 GSE1Q14687 1217 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 SKOR2Q2VWA4 1001 aaPredicted RBP12.88□□□□□ -0.35
CPEB4-203ENST00000517880 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
CPEB4-203ENST00000517880 ATRNO75882 1429 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
CPEB4-203ENST00000517880 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
CPEB4-203ENST00000517880 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
CPEB4-203ENST00000517880 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 VGLL2Q8N8G2 317 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 LPIN2Q92539 896 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
CPEB4-203ENST00000517880 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
CPEB4-203ENST00000517880 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
CPEB4-203ENST00000517880 AFF2P51816 1311 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 HSPA1LP34931 641 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms