RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 GPTP24298 496 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 SSFA2P28290 1259 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 TTC39AQ5SRH9 613 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 DBNDD2Q9BQY9 259 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 DBNLQ9UJU6 430 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
SPIDR-204ENST00000517824 TCHHQ07283 1943 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 A0A1B0GUL6 1792 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 TRAK2O60296 914 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 IL17RAQ96F46 866 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SPIDR-204ENST00000517824 HAUS7Q99871 368 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
SPIDR-204ENST00000517824 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 ZBTB1Q9Y2K1 713 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-204ENST00000517824 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
SPIDR-204ENST00000517824 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
SPIDR-204ENST00000517824 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
SPIDR-204ENST00000517824 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 KRT32Q14532 448 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
SPIDR-204ENST00000517824 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
SPIDR-204ENST00000517824 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 CTSWP56202 376 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-204ENST00000517824 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-204ENST00000517824 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-204ENST00000517824 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
SPIDR-204ENST00000517824 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 GOLIM4O00461 696 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 PDE8AO60658 829 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 IL25Q9H293 177 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
SPIDR-204ENST00000517824 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
SPIDR-204ENST00000517824 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 GOLGA6L3A6NEY3 463 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 SIK1P57059 783 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 PTH1RQ03431 593 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 CUL4AQ13619 759 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 AK7Q96M32 723 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 GZF1Q9H116 711 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-204ENST00000517824 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
SPIDR-204ENST00000517824 AK2P54819 239 aa12.85□□□□□ -0.35
SPIDR-204ENST00000517824 FGD1P98174 961 aa12.85□□□□□ -0.35
SPIDR-204ENST00000517824 HLFQ16534 295 aa12.85□□□□□ -0.35
SPIDR-204ENST00000517824 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 291.4 ms