RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CSRNP1Q96S65 589 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 GGA3Q9NZ52 723 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 POLLQ9UGP5 575 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 GPSM2P81274 684 aa14.99□□□□□ -0.01
TRAPPC9-203ENST00000517667 CDCA5Q96FF9 252 aa14.99□□□□□ -0.01
TRAPPC9-203ENST00000517667 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 RIPK4P57078 832 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 DOK7Q18PE1 504 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 RASAL3Q86YV0 1011 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 PLBD2Q8NHP8 589 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 TBC1D16Q8TBP0 767 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 ZC3H12CQ9C0D7 883 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-203ENST00000517667 COL4A1P02462 1669 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 G3V3G9 751 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 FAM89AQ96GI7 184 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 KCNQ5Q9NR82 932 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
TRAPPC9-203ENST00000517667 PITPNM2Q9BZ72 1349 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 HSP90B1P14625 803 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 ZNF280AP59817 542 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 ANGEL2Q5VTE6 544 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 ANKRD13DQ6ZTN6 518 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 CHPF2Q9P2E5 772 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 HPS5Q9UPZ3 1129 aa14.96□□□□□ -0.01
TRAPPC9-203ENST00000517667 HOXB7P09629 217 aa14.95□□□□□ -0.02
TRAPPC9-203ENST00000517667 ANKIB1Q9P2G1 1089 aa14.95□□□□□ -0.02
TRAPPC9-203ENST00000517667 IRS4O14654 1257 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 UFL1O94874 794 aa14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 SCARF1Q14162 830 aa14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 NOM1Q5C9Z4 860 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 RSBN1LQ6PCB5 846 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 GGA1Q9UJY5 639 aa14.94□□□□□ -0.02
TRAPPC9-203ENST00000517667 ASTN2O75129 1339 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 ATP5J2-PTCD1G3V325 749 aa14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 TMPOP42166 694 aaKnown RBP14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 ZNF428Q96B54 188 aa14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 MYOZ2Q9NPC6 264 aa14.93□□□□□ -0.02
TRAPPC9-203ENST00000517667 CHL1O00533 1208 aa14.92□□□□□ -0.02
TRAPPC9-203ENST00000517667 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
TRAPPC9-203ENST00000517667 ZNF296Q8WUU4 475 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-203ENST00000517667 GCC1Q96CN9 775 aa14.92□□□□□ -0.02
TRAPPC9-203ENST00000517667 HYPKQ9NX55 129 aa14.92□□□□□ -0.02
TRAPPC9-203ENST00000517667 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC9-203ENST00000517667 ZBTB38Q8NAP3 1195 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC9-203ENST00000517667 XDHP47989 1333 aa14.91□□□□□ -0.02
TRAPPC9-203ENST00000517667 NF2P35240 595 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 TM4SF4P48230 202 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 SREBF2Q12772 1141 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 FBXO46Q6PJ61 603 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 PODNQ7Z5L7 613 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 GMLQ99445 158 aa14.9□□□□□ -0.02
TRAPPC9-203ENST00000517667 USP17L3A6NCW0 530 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 USP17L4A6NCW7 530 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 GPR25O00155 361 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 USP17L1Q7RTZ2 530 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 CFHR5Q9BXR6 569 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 SEC31BQ9NQW1 1179 aa14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 ZNF646O15015 1829 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-203ENST00000517667 GOLGA2Q08379 1002 aa14.88□□□□□ -0.03
TRAPPC9-203ENST00000517667 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC9-203ENST00000517667 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-203ENST00000517667 MYO3BQ8WXR4 1341 aa14.88□□□□□ -0.03
TRAPPC9-203ENST00000517667 UBE2Q2LH0YL09 131 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 MMP14P50281 582 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 RIC3Q7Z5B4 369 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 MYH3P11055 1940 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 LAMB1P07942 1786 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 SPEF2Q9C093 1822 aa14.87□□□□□ -0.03
TRAPPC9-203ENST00000517667 MED23Q9ULK4 1368 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 PDE8AO60658 829 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 FKTNO75072 461 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 ATP2B4P23634 1241 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 MOB2Q70IA6 237 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 ANKRD18AQ8IVF6 992 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 CCDC191Q8NCU4 936 aa14.86□□□□□ -0.03
TRAPPC9-203ENST00000517667 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
TRAPPC9-203ENST00000517667 PCCAP05165 728 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC9-203ENST00000517667 NBPF9Q3BBW0 867 aa14.85□□□□□ -0.03
TRAPPC9-203ENST00000517667 RALBP1Q15311 655 aa14.84□□□□□ -0.03
TRAPPC9-203ENST00000517667 DUSP27Q5VZP5 1158 aa14.84□□□□□ -0.03
TRAPPC9-203ENST00000517667 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
TRAPPC9-203ENST00000517667 CDC5LQ99459 802 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-203ENST00000517667 TRIM35Q9UPQ4 493 aa14.84□□□□□ -0.03
TRAPPC9-203ENST00000517667 COL1A1P02452 1464 aaPredicted RBP14.83□□□□□ -0.03
TRAPPC9-203ENST00000517667 WNT10BO00744 389 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms