RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PCDHGC4Q9Y5F7 938 aa5.13□□□□□ -1.59
RNU6-840P-201ENST00000517275 GADD45BO75293 160 aaPredicted RBP5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 DGAT1O75907 488 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 HMGB1P09429 215 aaKnown RBP5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 ATF4P18848 351 aaPredicted RBP5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 ITPKAP23677 461 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 FAM182BQ5T319 152 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 TTC39BQ5VTQ0 682 aaPredicted RBP5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 NBPF6Q5VWK0 638 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 SV2BQ7L1I2 683 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 DPH6Q7L8W6 267 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 MCF2L2Q86YR7 1114 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 CCNJLQ8IV13 435 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 SEC16BQ96JE7 1060 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 RHOVQ96L33 236 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 NBPF4Q96M43 638 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 CNTNAP3BQ96NU0 1288 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 TCF12Q99081 682 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 HIRIP3Q9BW71 556 aaPredicted RBP5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 CNTNAP3Q9BZ76 1288 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 CADPSQ9ULU8 1353 aa5.12□□□□□ -1.59
RNU6-840P-201ENST00000517275 PHF20L1A8MW92 1017 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 ATXN7O15265 892 aaPredicted RBP5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 MMP20O60882 483 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 POLR3DP05423 398 aaPredicted RBP5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 BMP1P13497 986 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 NRLP54845 237 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 TNP2Q05952 138 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 PAK2Q13177 524 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 COL9A2Q14055 689 aaPredicted RBP5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 VPS37DQ86XT2 251 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 ZFP42Q96MM3 310 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 LNPKQ9C0E8 428 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 GPAMQ9HCL2 828 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 TLR7Q9NYK1 1049 aaKnown RBP5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 PDZRN3Q9UPQ7 1066 aa5.11□□□□□ -1.59
RNU6-840P-201ENST00000517275 TMEM238LA0A1B0GVL6 79 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 SLC35F4A4IF30 521 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 FAM187AA6NFU0 413 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 H7C1W4 665 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 CYP2E1P05181 493 aaPredicted RBP5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 DNAJA1P31689 397 aaKnown RBP5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 RPS26P11Q5JNZ5 115 aaPredicted RBP5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 OXCT2Q9BYC2 517 aaPredicted RBP5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 EHD4Q9H223 541 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 LATS2Q9NRM7 1088 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 KBTBD4Q9NVX7 518 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 PPP4R2Q9NY27 417 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 ZFATQ9P243 1243 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 STRIP2Q9ULQ0 834 aa5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 TTF2Q9UNY4 1162 aaKnown RBP5.1□□□□□ -1.59
RNU6-840P-201ENST00000517275 RARAP10276 462 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 MAPTP10636 758 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 HSP90B1P14625 803 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 SOX9P48436 509 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 RPS26P62854 115 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 PLAURQ03405 335 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 SFSWAPQ12872 951 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 HYAL2Q12891 473 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 KIAA0825Q8IV33 1275 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 TRIM22Q8IYM9 498 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 CEP120Q8N960 986 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 TMEM102Q8N9M5 508 aaPredicted RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 DHX38Q92620 1227 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 TMEM74Q96NL1 305 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 DNAJC2Q99543 621 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 ZKSCAN3Q9BRR0 538 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 NT5C1AQ9BXI3 368 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 CEP44Q9C0F1 390 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 NUCKS1Q9H1E3 243 aaKnown RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 LIN7BQ9HAP6 207 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 COPRSQ9NQ92 184 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 KANSL3Q9P2N6 904 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 HCN2Q9UL51 889 aa5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 ATXN7L1Q9ULK2 861 aaPredicted RBP5.09□□□□□ -1.59
RNU6-840P-201ENST00000517275 NFKBIEO00221 500 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 NRG2O14511 850 aaPredicted RBP5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 SASH3O75995 380 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 PSAPP07602 524 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 GARTP22102 1010 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 TARSP26639 723 aaKnown RBP5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 GPLD1P80108 840 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 SPEM2Q0P670 501 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 SERINC3Q13530 473 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 CCDC85BQ15834 202 aaPredicted RBP5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 TRPM4Q8TD43 1214 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 SPON2Q9BUD6 331 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 LRRC3Q9BY71 257 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 MARK1Q9P0L2 795 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 PPP1R1BQ9UD71 204 aaPredicted RBP5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 ADAMTS1Q9UHI8 967 aa5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.08□□□□□ -1.6
RNU6-840P-201ENST00000517275 DCDC2BA2VCK2 349 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 FIGNL2A6NMB9 653 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 AXIN1O15169 862 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 BNIP3LO60238 219 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 SMARCA5O60264 1052 aaPredicted RBP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 GREM1O60565 184 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 NFKB1P19838 968 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms