RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ALKBH2Q6NS38 261 aa10.07□□□□□ -0.8
SCARNA1-201ENST00000517138 ELMSAN1Q6PJG2 1045 aa10.07□□□□□ -0.8
SCARNA1-201ENST00000517138 EGFL7Q9UHF1 273 aa10.07□□□□□ -0.8
SCARNA1-201ENST00000517138 ARHGAP4P98171 946 aa10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 PCSK7Q16549 785 aa10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 TTC39BQ5VTQ0 682 aaPredicted RBP10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
SCARNA1-201ENST00000517138 GPAT2Q6NUI2 795 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 ADAMTSL4Q6UY14 1074 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 GLYCTKQ8IVS8 523 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 FRRS1LQ9P0K9 344 aa10.05□□□□□ -0.8
SCARNA1-201ENST00000517138 ACPPP15309 386 aa10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 ATP11AP98196 1134 aa10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 TRAPPC3LQ5T215 181 aa10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 DMRTC2Q8IXT2 367 aaPredicted RBP10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
SCARNA1-201ENST00000517138 PIK3R2O00459 728 aa10.03□□□□□ -0.8
SCARNA1-201ENST00000517138 CHRNA4P43681 627 aa10.03□□□□□ -0.8
SCARNA1-201ENST00000517138 PDE4CQ08493 712 aa10.03□□□□□ -0.8
SCARNA1-201ENST00000517138 FOXD3Q9UJU5 478 aaPredicted RBP10.03□□□□□ -0.8
SCARNA1-201ENST00000517138 TRIM33Q9UPN9 1127 aa10.03□□□□□ -0.8
SCARNA1-201ENST00000517138 BRD1O95696 1058 aa10.02□□□□□ -0.81
SCARNA1-201ENST00000517138 GHRHP01286 108 aa10.02□□□□□ -0.81
SCARNA1-201ENST00000517138 PCSK2P16519 638 aa10.02□□□□□ -0.81
SCARNA1-201ENST00000517138 GRIK4Q16099 956 aa10.02□□□□□ -0.81
SCARNA1-201ENST00000517138 GJD3Q8N144 294 aa10.02□□□□□ -0.81
SCARNA1-201ENST00000517138 A0A0A0MRY4 1105 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 KIF4AO95239 1232 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 BAG6P46379 1132 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 HYAL2Q12891 473 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 CD163Q86VB7 1156 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 TTC9Q92623 222 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 RASSF4Q9H2L5 321 aa10.01□□□□□ -0.81
SCARNA1-201ENST00000517138 C1QTNF9BB2RNN3 333 aa10□□□□□ -0.81
SCARNA1-201ENST00000517138 TNFRSF21O75509 655 aa10□□□□□ -0.81
SCARNA1-201ENST00000517138 TRPA1O75762 1119 aa10□□□□□ -0.81
SCARNA1-201ENST00000517138 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
SCARNA1-201ENST00000517138 CCER1Q8TC90 406 aaPredicted RBP10□□□□□ -0.81
SCARNA1-201ENST00000517138 SOWAHDA6NJG2 315 aa9.99□□□□□ -0.81
SCARNA1-201ENST00000517138 EREGO14944 169 aa9.99□□□□□ -0.81
SCARNA1-201ENST00000517138 SPATA31C1P0DKV0 1188 aa9.99□□□□□ -0.81
SCARNA1-201ENST00000517138 CEP120Q8N960 986 aa9.99□□□□□ -0.81
SCARNA1-201ENST00000517138 SALL4Q9UJQ4 1053 aa9.99□□□□□ -0.81
SCARNA1-201ENST00000517138 PROCP04070 461 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 CES1P23141 567 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 TRIM28Q13263 835 aaKnown RBP9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 ALYREFQ86V81 257 aaKnown RBP9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 HHIPQ96QV1 700 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 GNEQ9Y223 722 aaKnown RBP9.98□□□□□ -0.81
SCARNA1-201ENST00000517138 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
SCARNA1-201ENST00000517138 CEP135Q66GS9 1140 aa9.97□□□□□ -0.81
SCARNA1-201ENST00000517138 SHISA2Q6UWI4 295 aa9.97□□□□□ -0.81
SCARNA1-201ENST00000517138 BRPF3Q9ULD4 1205 aa9.97□□□□□ -0.81
SCARNA1-201ENST00000517138 USP5P45974 858 aa9.96□□□□□ -0.82
SCARNA1-201ENST00000517138 WFDC8Q8IUA0 241 aa9.96□□□□□ -0.82
SCARNA1-201ENST00000517138 FMR1NBQ8N0W7 255 aaPredicted RBP9.96□□□□□ -0.82
SCARNA1-201ENST00000517138 LACRTQ9GZZ8 138 aa9.96□□□□□ -0.82
SCARNA1-201ENST00000517138 SPDYE3A6NKU9 549 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 NFKBIEO00221 500 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 PHACTR2O75167 634 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 SELPP16109 830 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 IL22RA1Q8N6P7 574 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 TRAIPQ9BWF2 469 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 LATS2Q9NRM7 1088 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 IVNS1ABPQ9Y6Y0 642 aa9.95□□□□□ -0.82
SCARNA1-201ENST00000517138 IGHA2P01877 340 aa9.94□□□□□ -0.82
SCARNA1-201ENST00000517138 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
SCARNA1-201ENST00000517138 SNX29Q8TEQ0 813 aa9.94□□□□□ -0.82
SCARNA1-201ENST00000517138 POP1Q99575 1024 aaKnown RBP9.94□□□□□ -0.82
SCARNA1-201ENST00000517138 PBX4Q9BYU1 374 aa9.94□□□□□ -0.82
SCARNA1-201ENST00000517138 MSTNO14793 375 aa9.93□□□□□ -0.82
SCARNA1-201ENST00000517138 EHHADHQ08426 723 aa9.93□□□□□ -0.82
SCARNA1-201ENST00000517138 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
SCARNA1-201ENST00000517138 TXNDC11Q6PKC3 985 aa9.93□□□□□ -0.82
SCARNA1-201ENST00000517138 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
SCARNA1-201ENST00000517138 GPR182O15218 404 aa9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 CDC25BP30305 580 aa9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 ORC1Q13415 861 aa9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 FAM129BQ96TA1 746 aa9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 ZFYVE28Q9HCC9 887 aa9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 SH2B1Q9NRF2 756 aaPredicted RBP9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 BIN2Q9UBW5 565 aaPredicted RBP9.92□□□□□ -0.82
SCARNA1-201ENST00000517138 NDUFB5O43674 189 aa9.91□□□□□ -0.82
SCARNA1-201ENST00000517138 ELNP15502 786 aa9.91□□□□□ -0.82
SCARNA1-201ENST00000517138 RAC1P63000 192 aa9.91□□□□□ -0.82
SCARNA1-201ENST00000517138 PEAR1Q5VY43 1037 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms