RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 AFF2P51816 1311 aa11.3□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 PSMA5P28066 241 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 ATP2B3Q16720 1220 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 ZNF512BQ96KM6 892 aaPredicted RBP11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TAF5LO75529 589 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 NTSR2O95665 410 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 ZFYP08048 801 aaPredicted RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 HSPA1LP34931 641 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 KRT32Q14532 448 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TSGA10IPQ3SY00 556 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 CREB3L3Q68CJ9 461 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 SYNE4Q8N205 404 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 TTC14Q96N46 770 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
RNU4ATAC12P-201ENST00000516460 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 GOLIM4O00461 696 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SLC27A2O14975 620 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 RPS6KA4O75676 772 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SSFA2P28290 1259 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 RPAP1Q9BWH6 1393 aaPredicted RBP11.27□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 GOLGA6L22H0YM25 854 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 PDE8BO95263 885 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 CASTP20810 708 aaKnown RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 MPHOSPH8Q99549 860 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SLC5A1P13866 664 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ADORA1P30542 326 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 IGHMBP2P38935 993 aaKnown RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 GSE1Q14687 1217 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZSCAN25Q6NSZ9 544 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 RUFY3Q7L099 469 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 LPIN2Q92539 896 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 DSCC1Q9BVC3 393 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 NYXQ9GZU5 481 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 PDRG1Q9NUG6 133 aa11.25□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 FGFR2P21802 821 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 AK2P54819 239 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SKOR2Q2VWA4 1001 aaPredicted RBP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SEPT12Q8IYM1 358 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 GNPATO15228 680 aa11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ZPR1O75312 459 aa11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 ADCK5Q3MIX3 580 aa11.23□□□□□ -0.61
RNU4ATAC12P-201ENST00000516460 SLC10A5Q5PT55 438 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms