RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 RIMBP2O15034 1052 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 CCT4P50991 539 aaKnown RBP24.44■■□□□ 1.5
LMNA-225ENST00000515824 EPHA10Q5JZY3 1008 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 ARHGAP45Q92619 1136 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 ZC3H12CQ9C0D7 883 aaKnown RBP24.44■■□□□ 1.5
LMNA-225ENST00000515824 MINPP1Q9UNW1 487 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 GJA3Q9Y6H8 435 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 IPO8O15397 1037 aaKnown RBP24.43■■□□□ 1.5
LMNA-225ENST00000515824 UFL1O94874 794 aa24.43■■□□□ 1.5
LMNA-225ENST00000515824 CCDC57Q2TAC2 916 aa24.43■■□□□ 1.5
LMNA-225ENST00000515824 WDR90Q96KV7 1748 aa24.43■■□□□ 1.5
LMNA-225ENST00000515824 COL4A5P29400 1685 aa24.43■■□□□ 1.5
LMNA-225ENST00000515824 ATP2B4P23634 1241 aa24.42■■□□□ 1.5
LMNA-225ENST00000515824 SUCLG2Q96I99 432 aa24.42■■□□□ 1.5
LMNA-225ENST00000515824 USP44Q9H0E7 712 aa24.41■■□□□ 1.5
LMNA-225ENST00000515824 G3V3G9 751 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 BCAR3O75815 825 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 CXCL9Q07325 125 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 TAF7LQ5H9L4 462 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 DCAF8Q5TAQ9 597 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 ANKRD2Q9GZV1 360 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 HACL1Q9UJ83 578 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 DUOX1Q9NRD9 1551 aa24.4■■□□□ 1.5
LMNA-225ENST00000515824 FSTL1Q12841 308 aa24.39■■□□□ 1.49
LMNA-225ENST00000515824 TNIP1Q15025 636 aa24.39■■□□□ 1.49
LMNA-225ENST00000515824 CIAPIN1Q6FI81 312 aa24.39■■□□□ 1.49
LMNA-225ENST00000515824 SMC1BQ8NDV3 1235 aa24.39■■□□□ 1.49
LMNA-225ENST00000515824 KAZALD1Q96I82 304 aa24.39■■□□□ 1.49
LMNA-225ENST00000515824 GPR101Q96P66 508 aaPredicted RBP24.39■■□□□ 1.49
LMNA-225ENST00000515824 LMOD1P29536 600 aaPredicted RBP24.38■■□□□ 1.49
LMNA-225ENST00000515824 FRAT1Q92837 279 aaPredicted RBP24.38■■□□□ 1.49
LMNA-225ENST00000515824 TAF1DQ9H5J8 278 aaPredicted RBP24.38■■□□□ 1.49
LMNA-225ENST00000515824 BICC1Q9H694 974 aaKnown RBP24.38■■□□□ 1.49
LMNA-225ENST00000515824 DBNDD1Q9H9R9 158 aa24.38■■□□□ 1.49
LMNA-225ENST00000515824 RAD17O75943 681 aa24.37■■□□□ 1.49
LMNA-225ENST00000515824 DOK7Q18PE1 504 aa24.37■■□□□ 1.49
LMNA-225ENST00000515824 LEMD3Q9Y2U8 911 aa24.37■■□□□ 1.49
LMNA-225ENST00000515824 YDJCA8MPS7 323 aa24.36■■□□□ 1.49
LMNA-225ENST00000515824 EPHX2P34913 555 aa24.36■■□□□ 1.49
LMNA-225ENST00000515824 RABL6Q3YEC7 729 aaPredicted RBP24.36■■□□□ 1.49
LMNA-225ENST00000515824 LDHAL6AQ6ZMR3 332 aa24.36■■□□□ 1.49
LMNA-225ENST00000515824 HDAC5Q9UQL6 1122 aa24.36■■□□□ 1.49
LMNA-225ENST00000515824 ECE2O60344 883 aa24.35■■□□□ 1.49
LMNA-225ENST00000515824 CHRNDQ07001 517 aa24.35■■□□□ 1.49
LMNA-225ENST00000515824 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
LMNA-225ENST00000515824 ZNF594Q96JF6 807 aaPredicted RBP24.35■■□□□ 1.49
LMNA-225ENST00000515824 HSPA6P17066 643 aa24.34■■□□□ 1.49
LMNA-225ENST00000515824 SCNN1DP51172 638 aa24.34■■□□□ 1.49
LMNA-225ENST00000515824 PNMA8AQ86V59 439 aaPredicted RBP24.34■■□□□ 1.49
LMNA-225ENST00000515824 CNNM1Q9NRU3 951 aa24.34■■□□□ 1.49
LMNA-225ENST00000515824 LTBP1Q14766 1721 aa24.34■■□□□ 1.49
LMNA-225ENST00000515824 UBTFL1P0CB47 393 aaPredicted RBP24.33■■□□□ 1.49
LMNA-225ENST00000515824 TRIM27P14373 513 aa24.33■■□□□ 1.49
LMNA-225ENST00000515824 KCNJ4P48050 445 aa24.33■■□□□ 1.49
LMNA-225ENST00000515824 EAPPQ56P03 285 aaPredicted RBP24.33■■□□□ 1.49
LMNA-225ENST00000515824 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.49
LMNA-225ENST00000515824 SCN4AP35499 1836 aa24.33■■□□□ 1.48
LMNA-225ENST00000515824 ZNF804BA4D1E1 1349 aa24.33■■□□□ 1.48
LMNA-225ENST00000515824 ZKSCAN2Q63HK3 967 aa24.32■■□□□ 1.48
LMNA-225ENST00000515824 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
LMNA-225ENST00000515824 MED23Q9ULK4 1368 aa24.31■■□□□ 1.48
LMNA-225ENST00000515824 WTIPA6NIX2 430 aaPredicted RBP24.31■■□□□ 1.48
LMNA-225ENST00000515824 GMPSP49915 693 aaPredicted RBP24.31■■□□□ 1.48
LMNA-225ENST00000515824 CHADLQ6NUI6 762 aa24.31■■□□□ 1.48
LMNA-225ENST00000515824 PODNQ7Z5L7 613 aa24.31■■□□□ 1.48
LMNA-225ENST00000515824 LDHDQ86WU2 507 aa24.31■■□□□ 1.48
LMNA-225ENST00000515824 PSMD14O00487 310 aa24.3■■□□□ 1.48
LMNA-225ENST00000515824 EPS15P42566 896 aa24.3■■□□□ 1.48
LMNA-225ENST00000515824 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
LMNA-225ENST00000515824 CLEC11AQ9Y240 323 aa24.3■■□□□ 1.48
LMNA-225ENST00000515824 TAF5LO75529 589 aa24.29■■□□□ 1.48
LMNA-225ENST00000515824 POTEIP0CG38 1075 aa24.29■■□□□ 1.48
LMNA-225ENST00000515824 POTEJP0CG39 1038 aa24.29■■□□□ 1.48
LMNA-225ENST00000515824 HELBQ8NG08 1087 aaPredicted RBP24.29■■□□□ 1.48
LMNA-225ENST00000515824 CLUAP1Q96AJ1 413 aa24.29■■□□□ 1.48
LMNA-225ENST00000515824 KCNQ5Q9NR82 932 aa24.29■■□□□ 1.48
LMNA-225ENST00000515824 SPEF2Q9C093 1822 aa24.28■■□□□ 1.48
LMNA-225ENST00000515824 PLIN1O60240 522 aa24.28■■□□□ 1.48
LMNA-225ENST00000515824 DPF2Q92785 391 aa24.28■■□□□ 1.48
LMNA-225ENST00000515824 ADARB2Q9NS39 739 aaKnown RBP24.28■■□□□ 1.48
LMNA-225ENST00000515824 GNAI3P08754 354 aa24.27■■□□□ 1.48
LMNA-225ENST00000515824 USP50Q70EL3 339 aaPredicted RBP24.27■■□□□ 1.48
LMNA-225ENST00000515824 MEIS3Q99687 375 aa24.27■■□□□ 1.48
LMNA-225ENST00000515824 COA1Q9GZY4 146 aa24.27■■□□□ 1.48
LMNA-225ENST00000515824 TNNQ9UQP3 1299 aa24.27■■□□□ 1.48
LMNA-225ENST00000515824 ZBTB12Q9Y330 459 aaPredicted RBP24.27■■□□□ 1.48
LMNA-225ENST00000515824 VIL1P09327 827 aaKnown RBP24.26■■□□□ 1.47
LMNA-225ENST00000515824 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
LMNA-225ENST00000515824 APLP1P51693 650 aa24.26■■□□□ 1.47
LMNA-225ENST00000515824 PUS3Q9BZE2 481 aaKnown RBP24.26■■□□□ 1.47
LMNA-225ENST00000515824 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
LMNA-225ENST00000515824 RIPOR2Q9Y4F9 1068 aa24.26■■□□□ 1.47
LMNA-225ENST00000515824 LRRFIP2Q9Y608 721 aaKnown RBP24.26■■□□□ 1.47
LMNA-225ENST00000515824 H7C1D1 291 aa24.25■■□□□ 1.47
LMNA-225ENST00000515824 TXNRD3Q86VQ6 643 aa24.25■■□□□ 1.47
LMNA-225ENST00000515824 MROH5Q6ZUA9 1318 aa24.25■■□□□ 1.47
LMNA-225ENST00000515824 USP17L3A6NCW0 530 aa24.24■■□□□ 1.47
LMNA-225ENST00000515824 USP17L4A6NCW7 530 aa24.24■■□□□ 1.47
LMNA-225ENST00000515824 SNAP23O00161 211 aa24.24■■□□□ 1.47
LMNA-225ENST00000515824 C15orf52Q6ZUT6 534 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms