RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
PTCD2-210ENST00000515198 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
PTCD2-210ENST00000515198 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
PTCD2-210ENST00000515198 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
PTCD2-210ENST00000515198 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
PTCD2-210ENST00000515198 COL4A5P29400 1685 aa15.72■□□□□ 0.11
PTCD2-210ENST00000515198 XDHP47989 1333 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 DDNO94850 711 aaPredicted RBP15.71■□□□□ 0.11
PTCD2-210ENST00000515198 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
PTCD2-210ENST00000515198 CCDC57Q2TAC2 916 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 EPHA10Q5JZY3 1008 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
PTCD2-210ENST00000515198 UFL1O94874 794 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 ZNRF3Q9ULT6 936 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
PTCD2-210ENST00000515198 TOMM70O94826 608 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 KCNA4P22459 653 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 C1QTNF8P60827 252 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 TAF7LQ5H9L4 462 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 GPC2Q8N158 579 aa15.69■□□□□ 0.1
PTCD2-210ENST00000515198 ZC3H12CQ9C0D7 883 aaKnown RBP15.69■□□□□ 0.1
PTCD2-210ENST00000515198 SCN4AP35499 1836 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 G3V3G9 751 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-210ENST00000515198 TRIM27P14373 513 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
PTCD2-210ENST00000515198 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-210ENST00000515198 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
PTCD2-210ENST00000515198 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
PTCD2-210ENST00000515198 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
PTCD2-210ENST00000515198 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PTCD2-210ENST00000515198 TNIP1Q15025 636 aa15.66■□□□□ 0.1
PTCD2-210ENST00000515198 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
PTCD2-210ENST00000515198 ANKRD44Q8N8A2 993 aa15.66■□□□□ 0.1
PTCD2-210ENST00000515198 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
PTCD2-210ENST00000515198 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
PTCD2-210ENST00000515198 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
PTCD2-210ENST00000515198 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 POTECB2RU33 542 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 ECE2O60344 883 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 GNAI3P08754 354 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-210ENST00000515198 CHRNDQ07001 517 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 CXCL9Q07325 125 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 RBM46Q8TBY0 533 aaKnown RBP15.65■□□□□ 0.1
PTCD2-210ENST00000515198 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-210ENST00000515198 DBNDD1Q9H9R9 158 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 HACL1Q9UJ83 578 aa15.65■□□□□ 0.1
PTCD2-210ENST00000515198 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
PTCD2-210ENST00000515198 RAD17O75943 681 aa15.64■□□□□ 0.09
PTCD2-210ENST00000515198 KCNJ4P48050 445 aa15.64■□□□□ 0.09
PTCD2-210ENST00000515198 DOK7Q18PE1 504 aa15.64■□□□□ 0.09
PTCD2-210ENST00000515198 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
PTCD2-210ENST00000515198 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
PTCD2-210ENST00000515198 YDJCA8MPS7 323 aa15.63■□□□□ 0.09
PTCD2-210ENST00000515198 MEIS3Q99687 375 aa15.63■□□□□ 0.09
PTCD2-210ENST00000515198 TNNQ9UQP3 1299 aa15.63■□□□□ 0.09
PTCD2-210ENST00000515198 LRRFIP2Q9Y608 721 aaKnown RBP15.63■□□□□ 0.09
PTCD2-210ENST00000515198 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
PTCD2-210ENST00000515198 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
PTCD2-210ENST00000515198 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-210ENST00000515198 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-210ENST00000515198 PLIN1O60240 522 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 TAF5LO75529 589 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 EPHX2P34913 555 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 FSTL1Q12841 308 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 PNMA8AQ86V59 439 aaPredicted RBP15.61■□□□□ 0.09
PTCD2-210ENST00000515198 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 RCAN3Q9UKA8 241 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 MROH5Q6ZUA9 1318 aa15.61■□□□□ 0.09
PTCD2-210ENST00000515198 PSME4Q14997 1843 aa15.6■□□□□ 0.09
PTCD2-210ENST00000515198 WTIPA6NIX2 430 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-210ENST00000515198 PSMD14O00487 310 aa15.6■□□□□ 0.09
PTCD2-210ENST00000515198 MS4A1P11836 297 aa15.6■□□□□ 0.09
PTCD2-210ENST00000515198 SCNN1DP51172 638 aa15.6■□□□□ 0.09
PTCD2-210ENST00000515198 PUS3Q9BZE2 481 aaKnown RBP15.6■□□□□ 0.09
PTCD2-210ENST00000515198 SCN9AQ15858 1988 aa15.59■□□□□ 0.09
PTCD2-210ENST00000515198 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-210ENST00000515198 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-210ENST00000515198 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
PTCD2-210ENST00000515198 COA1Q9GZY4 146 aa15.59■□□□□ 0.09
PTCD2-210ENST00000515198 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
PTCD2-210ENST00000515198 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
PTCD2-210ENST00000515198 GNAI2P04899 355 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms