RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
SGCA-211ENST00000514934 NEXNQ0ZGT2 675 aa18.76■□□□□ 0.59
SGCA-211ENST00000514934 FKBP5Q13451 457 aaPredicted RBP18.76■□□□□ 0.59
SGCA-211ENST00000514934 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
SGCA-211ENST00000514934 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
SGCA-211ENST00000514934 CIAPIN1Q6FI81 312 aa18.76■□□□□ 0.59
SGCA-211ENST00000514934 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
SGCA-211ENST00000514934 CSF1RP07333 972 aa18.75■□□□□ 0.59
SGCA-211ENST00000514934 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
SGCA-211ENST00000514934 CNTROBQ8N137 903 aa18.75■□□□□ 0.59
SGCA-211ENST00000514934 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
SGCA-211ENST00000514934 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
SGCA-211ENST00000514934 FMR1Q06787 632 aaKnown RBP eCLIP18.74■□□□□ 0.59
SGCA-211ENST00000514934 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
SGCA-211ENST00000514934 CNTNAP1P78357 1384 aa18.73■□□□□ 0.59
SGCA-211ENST00000514934 PSMD14O00487 310 aa18.73■□□□□ 0.59
SGCA-211ENST00000514934 TRMT2AQ8IZ69 625 aaKnown RBP18.73■□□□□ 0.59
SGCA-211ENST00000514934 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
SGCA-211ENST00000514934 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 ECE2O60344 883 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 CAPN15O75808 1086 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
SGCA-211ENST00000514934 FOXO4P98177 505 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 ANKRD18AQ8IVF6 992 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 TRPM4Q8TD43 1214 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
SGCA-211ENST00000514934 XDHP47989 1333 aa18.72■□□□□ 0.59
SGCA-211ENST00000514934 UFL1O94874 794 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 EGFRP00533 1210 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 TNIP1Q15025 636 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 MINPP1Q9UNW1 487 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
SGCA-211ENST00000514934 IRS2Q9Y4H2 1338 aa18.71■□□□□ 0.59
SGCA-211ENST00000514934 DPF2Q92785 391 aa18.7■□□□□ 0.58
SGCA-211ENST00000514934 CDC5LQ99459 802 aaKnown RBP18.7■□□□□ 0.58
SGCA-211ENST00000514934 GGA1Q9UJY5 639 aa18.7■□□□□ 0.58
SGCA-211ENST00000514934 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
SGCA-211ENST00000514934 MED23Q9ULK4 1368 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 TMEM88BA6NKF7 163 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 TRAF5O00463 557 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 VIL1P09327 827 aaKnown RBP18.69■□□□□ 0.58
SGCA-211ENST00000514934 MRPL50Q8N5N7 158 aaKnown RBP18.69■□□□□ 0.58
SGCA-211ENST00000514934 CDCA7LQ96GN5 454 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 KAZALD1Q96I82 304 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 EYA3Q99504 573 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 CNOT7Q9UIV1 285 aaKnown RBP18.69■□□□□ 0.58
SGCA-211ENST00000514934 ECM29Q5VYK3 1845 aa18.69■□□□□ 0.58
SGCA-211ENST00000514934 ITGA6P23229 1130 aa18.68■□□□□ 0.58
SGCA-211ENST00000514934 CST9Q5W186 159 aa18.68■□□□□ 0.58
SGCA-211ENST00000514934 MICALL2Q8IY33 904 aa18.68■□□□□ 0.58
SGCA-211ENST00000514934 GMLQ99445 158 aa18.68■□□□□ 0.58
SGCA-211ENST00000514934 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
SGCA-211ENST00000514934 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
SGCA-211ENST00000514934 ARAP2Q8WZ64 1704 aa18.67■□□□□ 0.58
SGCA-211ENST00000514934 RASSF10A6NK89 507 aa18.67■□□□□ 0.58
SGCA-211ENST00000514934 E9PSI1 815 aa18.67■□□□□ 0.58
SGCA-211ENST00000514934 TXNRD3Q86VQ6 643 aa18.67■□□□□ 0.58
SGCA-211ENST00000514934 UTYO14607 1347 aa18.67■□□□□ 0.58
SGCA-211ENST00000514934 GRM8O00222 908 aa18.66■□□□□ 0.58
SGCA-211ENST00000514934 ATP2B4P23634 1241 aa18.66■□□□□ 0.58
SGCA-211ENST00000514934 KLRK1P26718 216 aa18.66■□□□□ 0.58
SGCA-211ENST00000514934 SSH1Q8WYL5 1049 aa18.66■□□□□ 0.58
SGCA-211ENST00000514934 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
SGCA-211ENST00000514934 ALDH1L1O75891 902 aa18.65■□□□□ 0.58
SGCA-211ENST00000514934 RPS12P25398 132 aaKnown RBP18.65■□□□□ 0.58
SGCA-211ENST00000514934 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
SGCA-211ENST00000514934 SAMD7Q7Z3H4 446 aa18.65■□□□□ 0.58
SGCA-211ENST00000514934 ZC3H15Q8WU90 426 aaKnown RBP18.65■□□□□ 0.58
SGCA-211ENST00000514934 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
SGCA-211ENST00000514934 VEGFBP49765 207 aa18.64■□□□□ 0.57
SGCA-211ENST00000514934 ZNF280AP59817 542 aaPredicted RBP18.64■□□□□ 0.57
SGCA-211ENST00000514934 GLIS2Q9BZE0 524 aaPredicted RBP18.64■□□□□ 0.57
SGCA-211ENST00000514934 DLK2Q6UY11 383 aa18.63■□□□□ 0.57
SGCA-211ENST00000514934 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
SGCA-211ENST00000514934 NBPF7P0C2Y1 421 aaPredicted RBP18.62■□□□□ 0.57
SGCA-211ENST00000514934 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
SGCA-211ENST00000514934 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
SGCA-211ENST00000514934 RSBN1LQ6PCB5 846 aaPredicted RBP18.62■□□□□ 0.57
SGCA-211ENST00000514934 ASTN2O75129 1339 aaPredicted RBP18.61■□□□□ 0.57
SGCA-211ENST00000514934 SNAP23O00161 211 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 IGHMBP2P38935 993 aaKnown RBP18.61■□□□□ 0.57
SGCA-211ENST00000514934 CHRNDQ07001 517 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 TBC1D10BQ4KMP7 808 aaPredicted RBP18.61■□□□□ 0.57
SGCA-211ENST00000514934 DACT2Q5SW24 774 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 LMBR1LQ6UX01 489 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 PODNQ7Z5L7 613 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 SRCIN1Q9C0H9 1055 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
SGCA-211ENST00000514934 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
SGCA-211ENST00000514934 PTPRCP08575 1304 aa18.6■□□□□ 0.57
SGCA-211ENST00000514934 H7C1D1 291 aa18.6■□□□□ 0.57
SGCA-211ENST00000514934 C15orf52Q6ZUT6 534 aaKnown RBP18.6■□□□□ 0.57
SGCA-211ENST00000514934 AGBL3Q8NEM8 1001 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms