RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 GMPSP49915 693 aaPredicted RBP31.11■■■□□ 2.57
SNF8-213ENST00000514929 SLC4A10Q6U841 1118 aa31.11■■■□□ 2.57
SNF8-213ENST00000514929 BCL2L13Q9BXK5 485 aa31.11■■■□□ 2.57
SNF8-213ENST00000514929 GPRC5DQ9NZD1 345 aa31.11■■■□□ 2.57
SNF8-213ENST00000514929 XDHP47989 1333 aa31.1■■■□□ 2.57
SNF8-213ENST00000514929 DOK7Q18PE1 504 aa31.1■■■□□ 2.57
SNF8-213ENST00000514929 KLRG1Q96E93 195 aa31.1■■■□□ 2.57
SNF8-213ENST00000514929 CDCA7LQ96GN5 454 aa31.1■■■□□ 2.57
SNF8-213ENST00000514929 G3V3G9 751 aa31.09■■■□□ 2.57
SNF8-213ENST00000514929 DCAF8Q5TAQ9 597 aa31.09■■■□□ 2.57
SNF8-213ENST00000514929 USP50Q70EL3 339 aaPredicted RBP31.09■■■□□ 2.57
SNF8-213ENST00000514929 BSDC1Q9NW68 430 aaPredicted RBP31.09■■■□□ 2.57
SNF8-213ENST00000514929 ECE2O60344 883 aa31.08■■■□□ 2.57
SNF8-213ENST00000514929 IGHMBP2P38935 993 aaKnown RBP31.08■■■□□ 2.57
SNF8-213ENST00000514929 MAP1SQ66K74 1059 aaPredicted RBP31.08■■■□□ 2.57
SNF8-213ENST00000514929 ADARB2Q9NS39 739 aaKnown RBP31.08■■■□□ 2.57
SNF8-213ENST00000514929 SPEF2Q9C093 1822 aa31.08■■■□□ 2.57
SNF8-213ENST00000514929 ITGA6P23229 1130 aa31.07■■■□□ 2.56
SNF8-213ENST00000514929 FAM161AQ3B820 660 aa31.07■■■□□ 2.56
SNF8-213ENST00000514929 MRPL50Q8N5N7 158 aaKnown RBP31.07■■■□□ 2.56
SNF8-213ENST00000514929 CSF1RP07333 972 aa31.06■■■□□ 2.56
SNF8-213ENST00000514929 ATP2B4P23634 1241 aa31.06■■■□□ 2.56
SNF8-213ENST00000514929 CNTROBQ8N137 903 aa31.06■■■□□ 2.56
SNF8-213ENST00000514929 PASKQ96RG2 1323 aa31.05■■■□□ 2.56
SNF8-213ENST00000514929 GRM8O00222 908 aa31.05■■■□□ 2.56
SNF8-213ENST00000514929 ALDH1L1O75891 902 aa31.05■■■□□ 2.56
SNF8-213ENST00000514929 ITGBL1O95965 494 aaPredicted RBP31.05■■■□□ 2.56
SNF8-213ENST00000514929 SRCIN1Q9C0H9 1055 aa31.05■■■□□ 2.56
SNF8-213ENST00000514929 C9orf78Q9NZ63 289 aaPredicted RBP31.05■■■□□ 2.56
SNF8-213ENST00000514929 MINPP1Q9UNW1 487 aa31.05■■■□□ 2.56
SNF8-213ENST00000514929 DIEXFQ68CQ4 756 aaKnown RBP31.04■■■□□ 2.56
SNF8-213ENST00000514929 SSH1Q8WYL5 1049 aa31.04■■■□□ 2.56
SNF8-213ENST00000514929 CREBZFQ9NS37 354 aa31.04■■■□□ 2.56
SNF8-213ENST00000514929 PSMD14O00487 310 aa31.03■■■□□ 2.56
SNF8-213ENST00000514929 MPHOSPH8Q99549 860 aa31.03■■■□□ 2.56
SNF8-213ENST00000514929 CHMP3Q9Y3E7 222 aa31.03■■■□□ 2.56
SNF8-213ENST00000514929 ANKRD18BA2A2Z9 1011 aa31.02■■■□□ 2.56
SNF8-213ENST00000514929 ZBTB12Q9Y330 459 aaPredicted RBP31.02■■■□□ 2.56
SNF8-213ENST00000514929 PTPRCP08575 1304 aa31.01■■■□□ 2.56
SNF8-213ENST00000514929 FOXO4P98177 505 aa31.01■■■□□ 2.55
SNF8-213ENST00000514929 TRMT2AQ8IZ69 625 aaKnown RBP31.01■■■□□ 2.55
SNF8-213ENST00000514929 KCNQ5Q9NR82 932 aa31.01■■■□□ 2.55
SNF8-213ENST00000514929 CNOT7Q9UIV1 285 aaKnown RBP31.01■■■□□ 2.55
SNF8-213ENST00000514929 H7C1D1 291 aa31■■■□□ 2.55
SNF8-213ENST00000514929 DPF2Q92785 391 aa31■■■□□ 2.55
SNF8-213ENST00000514929 CCT4P50991 539 aaKnown RBP30.99■■■□□ 2.55
SNF8-213ENST00000514929 IFIT5Q13325 482 aaKnown RBP30.99■■■□□ 2.55
SNF8-213ENST00000514929 ALDH1L2Q3SY69 923 aa30.99■■■□□ 2.55
SNF8-213ENST00000514929 RPS12P25398 132 aaKnown RBP30.98■■■□□ 2.55
SNF8-213ENST00000514929 LMBR1LQ6UX01 489 aa30.98■■■□□ 2.55
SNF8-213ENST00000514929 MICALL2Q8IY33 904 aa30.98■■■□□ 2.55
SNF8-213ENST00000514929 MIER1Q8N108 512 aa30.98■■■□□ 2.55
SNF8-213ENST00000514929 ANKRD2Q9GZV1 360 aa30.98■■■□□ 2.55
SNF8-213ENST00000514929 WTIPA6NIX2 430 aaPredicted RBP30.97■■■□□ 2.55
SNF8-213ENST00000514929 TMEM88BA6NKF7 163 aa30.97■■■□□ 2.55
SNF8-213ENST00000514929 SMC4Q9NTJ3 1288 aa30.97■■■□□ 2.55
SNF8-213ENST00000514929 MED23Q9ULK4 1368 aa30.96■■■□□ 2.55
SNF8-213ENST00000514929 SHTN1A0MZ66 631 aa30.96■■■□□ 2.55
SNF8-213ENST00000514929 EPHA10Q5JZY3 1008 aa30.96■■■□□ 2.55
SNF8-213ENST00000514929 JMYQ8N9B5 988 aa30.96■■■□□ 2.55
SNF8-213ENST00000514929 LEMD3Q9Y2U8 911 aa30.96■■■□□ 2.55
SNF8-213ENST00000514929 SCN9AQ15858 1988 aa30.94■■■□□ 2.54
SNF8-213ENST00000514929 VIL1P09327 827 aaKnown RBP30.94■■■□□ 2.54
SNF8-213ENST00000514929 CT47B1P0C2W7 299 aaPredicted RBP30.94■■■□□ 2.54
SNF8-213ENST00000514929 CCDC57Q2TAC2 916 aa30.94■■■□□ 2.54
SNF8-213ENST00000514929 TRPM4Q8TD43 1214 aa30.94■■■□□ 2.54
SNF8-213ENST00000514929 MKRN1Q9UHC7 482 aaKnown RBP30.94■■■□□ 2.54
SNF8-213ENST00000514929 CHRNDQ07001 517 aa30.93■■■□□ 2.54
SNF8-213ENST00000514929 TAF7LQ5H9L4 462 aa30.93■■■□□ 2.54
SNF8-213ENST00000514929 PODNQ7Z5L7 613 aa30.93■■■□□ 2.54
SNF8-213ENST00000514929 ZNF804BA4D1E1 1349 aa30.93■■■□□ 2.54
SNF8-213ENST00000514929 NBPF7P0C2Y1 421 aaPredicted RBP30.92■■■□□ 2.54
SNF8-213ENST00000514929 KCNJ4P48050 445 aa30.92■■■□□ 2.54
SNF8-213ENST00000514929 HIRAP54198 1017 aaPredicted RBP30.92■■■□□ 2.54
SNF8-213ENST00000514929 ZC3H15Q8WU90 426 aaKnown RBP30.92■■■□□ 2.54
SNF8-213ENST00000514929 SAMD7Q7Z3H4 446 aa30.91■■■□□ 2.54
SNF8-213ENST00000514929 SUCLG2Q96I99 432 aa30.91■■■□□ 2.54
SNF8-213ENST00000514929 TBC1D10BQ4KMP7 808 aaPredicted RBP30.9■■■□□ 2.54
SNF8-213ENST00000514929 PGAP2Q9UHJ9 254 aa30.9■■■□□ 2.54
SNF8-213ENST00000514929 UTYO14607 1347 aa30.9■■■□□ 2.54
SNF8-213ENST00000514929 TRAF5O00463 557 aa30.89■■■□□ 2.54
SNF8-213ENST00000514929 FMR1Q06787 632 aaKnown RBP eCLIP30.89■■■□□ 2.54
SNF8-213ENST00000514929 RSBN1LQ6PCB5 846 aaPredicted RBP30.89■■■□□ 2.54
SNF8-213ENST00000514929 USP17L3A6NCW0 530 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 USP17L4A6NCW7 530 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 RBM26Q5T8P6 1007 aaKnown RBP30.88■■■□□ 2.53
SNF8-213ENST00000514929 LDHAL6AQ6ZMR3 332 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 USP17L1Q7RTZ2 530 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 ZNF594Q96JF6 807 aaPredicted RBP30.88■■■□□ 2.53
SNF8-213ENST00000514929 COA1Q9GZY4 146 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 CNTNAP1P78357 1384 aa30.88■■■□□ 2.53
SNF8-213ENST00000514929 PSME4Q14997 1843 aa30.87■■■□□ 2.53
SNF8-213ENST00000514929 TXNRD3Q86VQ6 643 aa30.87■■■□□ 2.53
SNF8-213ENST00000514929 AGBL3Q8NEM8 1001 aa30.87■■■□□ 2.53
SNF8-213ENST00000514929 HELBQ8NG08 1087 aaPredicted RBP30.87■■■□□ 2.53
SNF8-213ENST00000514929 KAZALD1Q96I82 304 aa30.87■■■□□ 2.53
SNF8-213ENST00000514929 GLIS2Q9BZE0 524 aaPredicted RBP30.87■■■□□ 2.53
SNF8-213ENST00000514929 CNNM1Q9NRU3 951 aa30.87■■■□□ 2.53
SNF8-213ENST00000514929 TAF5LO75529 589 aa30.86■■■□□ 2.53
SNF8-213ENST00000514929 ZNF609O15014 1411 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms