RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 PDE8AO60658 829 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 KCNA3P22001 575 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 CASP7P55210 303 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 PDE3AQ14432 1141 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 CWF19L2Q2TBE0 894 aaKnown RBP8.94□□□□□ -0.98
SMAD1-213ENST00000514778 GRIPAP1Q4V328 841 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 TMC4Q7Z404 712 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 NUTM1Q86Y26 1132 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 C2CD5Q86YS7 1000 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-213ENST00000514778 CRAMP1Q96RY5 1269 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 CHMP4BQ9H444 224 aaKnown RBP8.94□□□□□ -0.98
SMAD1-213ENST00000514778 C9orf78Q9NZ63 289 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-213ENST00000514778 RTL9Q8NET4 1388 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
SMAD1-213ENST00000514778 GNAI3P08754 354 aa8.93□□□□□ -0.98
SMAD1-213ENST00000514778 DPEP1P16444 411 aa8.93□□□□□ -0.98
SMAD1-213ENST00000514778 SOGA3Q5TF21 947 aa8.93□□□□□ -0.98
SMAD1-213ENST00000514778 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
SMAD1-213ENST00000514778 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
SMAD1-213ENST00000514778 RPGRQ92834 1020 aaKnown RBP8.93□□□□□ -0.98
SMAD1-213ENST00000514778 RBM17Q96I25 401 aaKnown RBP8.93□□□□□ -0.98
SMAD1-213ENST00000514778 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
SMAD1-213ENST00000514778 A0A0G2JLW4 131 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 GRIN3BO60391 1043 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 BBOX1O75936 387 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 CSF1RP07333 972 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 HCLS1P14317 486 aaPredicted RBP8.92□□□□□ -0.98
SMAD1-213ENST00000514778 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 DALRD3Q5D0E6 543 aaKnown RBP8.92□□□□□ -0.98
SMAD1-213ENST00000514778 CC2D2BQ6DHV5 1058 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 UBE3BQ7Z3V4 1068 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 TTLL6Q8N841 843 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 NLGN2Q8NFZ4 835 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 USP44Q9H0E7 712 aa8.92□□□□□ -0.98
SMAD1-213ENST00000514778 N4BP2Q86UW6 1770 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-213ENST00000514778 KIAA1551Q9HCM1 1747 aa8.91□□□□□ -0.98
SMAD1-213ENST00000514778 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
SMAD1-213ENST00000514778 HS6ST3Q8IZP7 471 aa8.91□□□□□ -0.98
SMAD1-213ENST00000514778 LAMB2P55268 1798 aa8.91□□□□□ -0.98
SMAD1-213ENST00000514778 DLEC1Q9Y238 1755 aa8.91□□□□□ -0.98
SMAD1-213ENST00000514778 ANKRD31Q8N7Z5 1873 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 POTEB3A0JP26 581 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 NBPF7P0C2Y1 421 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-213ENST00000514778 UBTFL1P0CB47 393 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-213ENST00000514778 CHRNA5P30532 468 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 CTSWP56202 376 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 FOXO4P98177 505 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 GRAPQ13588 217 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 AAMPQ13685 434 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 RABL6Q3YEC7 729 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-213ENST00000514778 POTEBQ6S5H4 581 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 SYNE4Q8N205 404 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 TTLL11Q8NHH1 800 aa8.9□□□□□ -0.98
SMAD1-213ENST00000514778 GRAPLQ8TC17 118 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-213ENST00000514778 ZNF622Q969S3 477 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMAD1-213ENST00000514778 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
SMAD1-213ENST00000514778 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
SMAD1-213ENST00000514778 PRPF40BQ6NWY9 871 aaKnown RBP8.89□□□□□ -0.99
SMAD1-213ENST00000514778 TMEM57Q8N5G2 664 aa8.89□□□□□ -0.99
SMAD1-213ENST00000514778 C7orf43Q8WVR3 580 aa8.89□□□□□ -0.99
SMAD1-213ENST00000514778 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
SMAD1-213ENST00000514778 CDC5LQ99459 802 aaKnown RBP8.89□□□□□ -0.99
SMAD1-213ENST00000514778 TMX4Q9H1E5 349 aaPredicted RBP8.89□□□□□ -0.99
SMAD1-213ENST00000514778 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
SMAD1-213ENST00000514778 DDX60Q8IY21 1712 aaKnown RBP8.88□□□□□ -0.99
SMAD1-213ENST00000514778 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
SMAD1-213ENST00000514778 KIF3CO14782 793 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 GNAI2P04899 355 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 RRP1P56182 461 aaKnown RBP8.88□□□□□ -0.99
SMAD1-213ENST00000514778 RPS8P62241 208 aaKnown RBP8.88□□□□□ -0.99
SMAD1-213ENST00000514778 MTX1Q13505 466 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 MVPQ14764 893 aaKnown RBP8.88□□□□□ -0.99
SMAD1-213ENST00000514778 GPR162Q16538 588 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 CCDC57Q2TAC2 916 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 SP8Q8IXZ3 490 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 RTKN2Q8IZC4 609 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 KAZALD1Q96I82 304 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 BCS1LQ9Y276 419 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 ATP6V0A2Q9Y487 856 aa8.88□□□□□ -0.99
SMAD1-213ENST00000514778 LTBP3Q9NS15 1303 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 ANKRD18BA2A2Z9 1011 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
SMAD1-213ENST00000514778 RLBP1P12271 317 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
SMAD1-213ENST00000514778 CCDC93Q567U6 631 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 LMBR1LQ6UX01 489 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 ANKRD18AQ8IVF6 992 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 ITPRIPQ8IWB1 547 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 SUCLG2Q96I99 432 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 MEIS3Q99687 375 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 GREM2Q9H772 168 aa8.87□□□□□ -0.99
SMAD1-213ENST00000514778 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
SMAD1-213ENST00000514778 COL11A2P13942 1736 aaPredicted RBP8.87□□□□□ -0.99
SMAD1-213ENST00000514778 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
SMAD1-213ENST00000514778 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms