RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CST9Q5W186 159 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 EYA3Q99504 573 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
PFDN1-206ENST00000514611 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
PFDN1-206ENST00000514611 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
PFDN1-206ENST00000514611 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
PFDN1-206ENST00000514611 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
PFDN1-206ENST00000514611 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
PFDN1-206ENST00000514611 EGFRP00533 1210 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 FLIIQ13045 1269 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
PFDN1-206ENST00000514611 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 GREM2Q9H772 168 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 GGA1Q9UJY5 639 aa17.08■□□□□ 0.32
PFDN1-206ENST00000514611 H7C1D1 291 aa17.07■□□□□ 0.32
PFDN1-206ENST00000514611 PAXIP1Q6ZW49 1069 aaPredicted RBP17.07■□□□□ 0.32
PFDN1-206ENST00000514611 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
PFDN1-206ENST00000514611 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
PFDN1-206ENST00000514611 CELF2O95319 508 aaKnown RBP17.06■□□□□ 0.32
PFDN1-206ENST00000514611 GRM1Q13255 1194 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 FKBP5Q13451 457 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-206ENST00000514611 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-206ENST00000514611 CYP4F22Q6NT55 531 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 DPF2Q92785 391 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 ZC3H12CQ9C0D7 883 aaKnown RBP17.06■□□□□ 0.32
PFDN1-206ENST00000514611 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-206ENST00000514611 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
PFDN1-206ENST00000514611 XDHP47989 1333 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
PFDN1-206ENST00000514611 CAPN15O75808 1086 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
PFDN1-206ENST00000514611 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
PFDN1-206ENST00000514611 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 CAPNS2Q96L46 248 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 CDC5LQ99459 802 aaKnown RBP17.05■□□□□ 0.32
PFDN1-206ENST00000514611 WBP1LQ9NX94 342 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 SCN9AQ15858 1988 aa17.05■□□□□ 0.32
PFDN1-206ENST00000514611 TRPM7Q96QT4 1865 aa17.04■□□□□ 0.32
PFDN1-206ENST00000514611 VAMP4O75379 141 aa17.04■□□□□ 0.32
PFDN1-206ENST00000514611 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
PFDN1-206ENST00000514611 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
PFDN1-206ENST00000514611 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 G3V3G9 751 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 H7C1W4 665 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 CASP7P55210 303 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 GCKRQ14397 625 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
PFDN1-206ENST00000514611 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
PFDN1-206ENST00000514611 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
PFDN1-206ENST00000514611 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 ECE1P42892 770 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 CTCFP49711 727 aaPredicted RBP17.02■□□□□ 0.32
PFDN1-206ENST00000514611 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
PFDN1-206ENST00000514611 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
PFDN1-206ENST00000514611 LBX1P52954 281 aa17.01■□□□□ 0.31
PFDN1-206ENST00000514611 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
PFDN1-206ENST00000514611 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
PFDN1-206ENST00000514611 MYH3P11055 1940 aa17.01■□□□□ 0.31
PFDN1-206ENST00000514611 MED23Q9ULK4 1368 aa17.01■□□□□ 0.31
PFDN1-206ENST00000514611 ASTN2O75129 1339 aaPredicted RBP17■□□□□ 0.31
PFDN1-206ENST00000514611 F6X3S4 739 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 ZNF609O15014 1411 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 AOC2O75106 756 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 HSPA8P11142 646 aaKnown RBP17■□□□□ 0.31
PFDN1-206ENST00000514611 ITGA6P23229 1130 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
PFDN1-206ENST00000514611 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
PFDN1-206ENST00000514611 LINS1Q8NG48 757 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
PFDN1-206ENST00000514611 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
PFDN1-206ENST00000514611 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
PFDN1-206ENST00000514611 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
PFDN1-206ENST00000514611 IGHMBP2P38935 993 aaKnown RBP16.98■□□□□ 0.31
PFDN1-206ENST00000514611 CSF1RP07333 972 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 KLRK1P26718 216 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 ZNF280AP59817 542 aaPredicted RBP16.97■□□□□ 0.31
PFDN1-206ENST00000514611 PODNQ7Z5L7 613 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 AGBL3Q8NEM8 1001 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
PFDN1-206ENST00000514611 GMLQ99445 158 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 PSME4Q14997 1843 aa16.97■□□□□ 0.31
PFDN1-206ENST00000514611 USP17L3A6NCW0 530 aa16.96■□□□□ 0.31
PFDN1-206ENST00000514611 USP17L4A6NCW7 530 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms