RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 VPS33BQ9H267 617 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 HDAC5Q9UQL6 1122 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
USP46-209ENST00000514536 KIF3CO14782 793 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
USP46-209ENST00000514536 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 MYH3P11055 1940 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 CEP350Q5VT06 3117 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 UFL1O94874 794 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
USP46-209ENST00000514536 XDHP47989 1333 aa17.48■□□□□ 0.39
USP46-209ENST00000514536 WTIPA6NIX2 430 aaPredicted RBP17.48■□□□□ 0.39
USP46-209ENST00000514536 ATP2B4P23634 1241 aa17.48■□□□□ 0.39
USP46-209ENST00000514536 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
USP46-209ENST00000514536 EYA3Q99504 573 aa17.48■□□□□ 0.39
USP46-209ENST00000514536 CCDC88AQ3V6T2 1871 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 FZD9O00144 591 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 MS4A1P11836 297 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 CHRNDQ07001 517 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
USP46-209ENST00000514536 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
USP46-209ENST00000514536 HELBQ8NG08 1087 aaPredicted RBP17.46■□□□□ 0.39
USP46-209ENST00000514536 PUS3Q9BZE2 481 aaKnown RBP17.46■□□□□ 0.39
USP46-209ENST00000514536 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
USP46-209ENST00000514536 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
USP46-209ENST00000514536 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
USP46-209ENST00000514536 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 LRRC37AA6NMS7 1700 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
USP46-209ENST00000514536 TAF5LO75529 589 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 GNAI2P04899 355 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 HSPA6P17066 643 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 RRAGCQ9HB90 399 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
USP46-209ENST00000514536 DUOX1Q9NRD9 1551 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 COL4A5P29400 1685 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 RFX5P48382 616 aaPredicted RBP17.44■□□□□ 0.38
USP46-209ENST00000514536 DOK7Q18PE1 504 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.44■□□□□ 0.38
USP46-209ENST00000514536 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
USP46-209ENST00000514536 SNAP23O00161 211 aa17.43■□□□□ 0.38
USP46-209ENST00000514536 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
USP46-209ENST00000514536 G3V3G9 751 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 KCNJ4P48050 445 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
USP46-209ENST00000514536 CXCL9Q07325 125 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 DCAF8Q5TAQ9 597 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
USP46-209ENST00000514536 DICER1Q9UPY3 1922 aaKnown RBP17.42■□□□□ 0.38
USP46-209ENST00000514536 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
USP46-209ENST00000514536 C20orf194Q5TEA3 1177 aa17.41■□□□□ 0.38
USP46-209ENST00000514536 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
USP46-209ENST00000514536 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 ECE2O60344 883 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 RAD17O75943 681 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
USP46-209ENST00000514536 TXNRD3Q86VQ6 643 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 GPC2Q8N158 579 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 POTECB2RU33 542 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 EYA2O00167 538 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 KLRK1P26718 216 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 MTX1Q13505 466 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 SIL1Q9H173 461 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
USP46-209ENST00000514536 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
USP46-209ENST00000514536 MROH5Q6ZUA9 1318 aa17.39■□□□□ 0.38
USP46-209ENST00000514536 LTBP1Q14766 1721 aa17.39■□□□□ 0.38
USP46-209ENST00000514536 TOMM70O94826 608 aa17.39■□□□□ 0.37
USP46-209ENST00000514536 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
USP46-209ENST00000514536 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
USP46-209ENST00000514536 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
USP46-209ENST00000514536 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
USP46-209ENST00000514536 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
USP46-209ENST00000514536 TNIP1Q15025 636 aa17.38■□□□□ 0.37
USP46-209ENST00000514536 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
USP46-209ENST00000514536 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
USP46-209ENST00000514536 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
USP46-209ENST00000514536 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
USP46-209ENST00000514536 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
USP46-209ENST00000514536 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
USP46-209ENST00000514536 PDE8BO95263 885 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms