RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 FKBP1BP68106 108 aa13.35□□□□□ -0.27
DDR1-276ENST00000514534 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
DDR1-276ENST00000514534 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
DDR1-276ENST00000514534 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
DDR1-276ENST00000514534 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
DDR1-276ENST00000514534 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 G3V3G9 751 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
DDR1-276ENST00000514534 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
DDR1-276ENST00000514534 CDCA5Q96FF9 252 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 PSME4Q14997 1843 aa13.34□□□□□ -0.27
DDR1-276ENST00000514534 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
DDR1-276ENST00000514534 GPSM2P81274 684 aa13.33□□□□□ -0.28
DDR1-276ENST00000514534 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
DDR1-276ENST00000514534 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
DDR1-276ENST00000514534 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
DDR1-276ENST00000514534 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
DDR1-276ENST00000514534 ZNF609O15014 1411 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 RIPK4P57078 832 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 AGBL3Q8NEM8 1001 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
DDR1-276ENST00000514534 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
DDR1-276ENST00000514534 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
DDR1-276ENST00000514534 ISCA1Q9BUE6 129 aa13.31□□□□□ -0.28
DDR1-276ENST00000514534 KCNQ5Q9NR82 932 aa13.31□□□□□ -0.28
DDR1-276ENST00000514534 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
DDR1-276ENST00000514534 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
DDR1-276ENST00000514534 HSP90B1P14625 803 aaKnown RBP13.3□□□□□ -0.28
DDR1-276ENST00000514534 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
DDR1-276ENST00000514534 SCARF1Q14162 830 aa13.3□□□□□ -0.28
DDR1-276ENST00000514534 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
DDR1-276ENST00000514534 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
DDR1-276ENST00000514534 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
DDR1-276ENST00000514534 UFL1O94874 794 aa13.29□□□□□ -0.28
DDR1-276ENST00000514534 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
DDR1-276ENST00000514534 FBXO46Q6PJ61 603 aaPredicted RBP13.29□□□□□ -0.28
DDR1-276ENST00000514534 ZNF296Q8WUU4 475 aaPredicted RBP13.29□□□□□ -0.28
DDR1-276ENST00000514534 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
DDR1-276ENST00000514534 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
DDR1-276ENST00000514534 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
DDR1-276ENST00000514534 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
DDR1-276ENST00000514534 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
DDR1-276ENST00000514534 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
DDR1-276ENST00000514534 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
DDR1-276ENST00000514534 DBF4Q9UBU7 674 aaPredicted RBP13.28□□□□□ -0.28
DDR1-276ENST00000514534 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
DDR1-276ENST00000514534 COL4A1P02462 1669 aa13.28□□□□□ -0.28
DDR1-276ENST00000514534 GPR25O00155 361 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 HOXB7P09629 217 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 NF2P35240 595 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 TM4SF4P48230 202 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 SREBF2Q12772 1141 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
DDR1-276ENST00000514534 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
DDR1-276ENST00000514534 TMPOP42166 694 aaKnown RBP13.26□□□□□ -0.29
DDR1-276ENST00000514534 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
DDR1-276ENST00000514534 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
DDR1-276ENST00000514534 PODNQ7Z5L7 613 aa13.26□□□□□ -0.29
DDR1-276ENST00000514534 HYPKQ9NX55 129 aa13.26□□□□□ -0.29
DDR1-276ENST00000514534 XDHP47989 1333 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 CHL1O00533 1208 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 FKTNO75072 461 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 KCNA4P22459 653 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 ZBTB38Q8NAP3 1195 aaPredicted RBP13.25□□□□□ -0.29
DDR1-276ENST00000514534 GMLQ99445 158 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
DDR1-276ENST00000514534 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
DDR1-276ENST00000514534 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
DDR1-276ENST00000514534 MOB2Q70IA6 237 aa13.24□□□□□ -0.29
DDR1-276ENST00000514534 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
DDR1-276ENST00000514534 SEC31BQ9NQW1 1179 aa13.24□□□□□ -0.29
DDR1-276ENST00000514534 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
DDR1-276ENST00000514534 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
DDR1-276ENST00000514534 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
DDR1-276ENST00000514534 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
DDR1-276ENST00000514534 MMP14P50281 582 aa13.23□□□□□ -0.29
DDR1-276ENST00000514534 OGFOD1Q8N543 542 aa13.23□□□□□ -0.29
DDR1-276ENST00000514534 PDE8AO60658 829 aa13.22□□□□□ -0.29
DDR1-276ENST00000514534 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
DDR1-276ENST00000514534 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
DDR1-276ENST00000514534 ARMC9Q7Z3E5 817 aa13.22□□□□□ -0.29
DDR1-276ENST00000514534 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
DDR1-276ENST00000514534 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
DDR1-276ENST00000514534 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
DDR1-276ENST00000514534 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
DDR1-276ENST00000514534 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.29
DDR1-276ENST00000514534 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms