RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 PTCH2Q9Y6C5 1203 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
CLDND1-229ENST00000513988 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-229ENST00000513988 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-229ENST00000513988 KIF4BQ2VIQ3 1234 aa10.54□□□□□ -0.72
CLDND1-229ENST00000513988 LRIT3Q3SXY7 679 aa10.54□□□□□ -0.72
CLDND1-229ENST00000513988 SHISA4Q96DD7 197 aa10.54□□□□□ -0.72
CLDND1-229ENST00000513988 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 EVI5O60447 810 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 HOXA10P31260 410 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-229ENST00000513988 SP3Q02447 781 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 ARHGEF6Q15052 776 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 TTC5Q8N0Z6 440 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
CLDND1-229ENST00000513988 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-229ENST00000513988 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 ASTN2O75129 1339 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-229ENST00000513988 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
CLDND1-229ENST00000513988 YDJCA8MPS7 323 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 A1BGP04217 495 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 RPS12P25398 132 aaKnown RBP10.52□□□□□ -0.73
CLDND1-229ENST00000513988 BMP8BP34820 402 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 BCAMP50895 628 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 INHBEP58166 350 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-229ENST00000513988 NKX2-3Q8TAU0 364 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 CRAMP1Q96RY5 1269 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-229ENST00000513988 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-229ENST00000513988 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.73
CLDND1-229ENST00000513988 RIC1Q4ADV7 1423 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 MANSC4A6NHS7 340 aaPredicted RBP10.51□□□□□ -0.73
CLDND1-229ENST00000513988 PSMD14O00487 310 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 ANGEL2Q5VTE6 544 aaKnown RBP10.51□□□□□ -0.73
CLDND1-229ENST00000513988 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
CLDND1-229ENST00000513988 UBE2Q1Q7Z7E8 422 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 GUCD1Q96NT3 240 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 CARD11Q9BXL7 1154 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 IRS2Q9Y4H2 1338 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
CLDND1-229ENST00000513988 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-229ENST00000513988 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-229ENST00000513988 CAP1Q01518 475 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 CRHR2Q13324 411 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-229ENST00000513988 GDF15Q99988 308 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 POLKQ9UBT6 870 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 ATP6V0A2Q9Y487 856 aa10.5□□□□□ -0.73
CLDND1-229ENST00000513988 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
CLDND1-229ENST00000513988 MAFAQ8NHW3 353 aaPredicted RBP10.49□□□□□ -0.73
CLDND1-229ENST00000513988 NYXQ9GZU5 481 aa10.49□□□□□ -0.73
CLDND1-229ENST00000513988 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
CLDND1-229ENST00000513988 HEG1Q9ULI3 1381 aa10.49□□□□□ -0.73
CLDND1-229ENST00000513988 IGF2BP3O00425 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLDND1-229ENST00000513988 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-229ENST00000513988 NF2P35240 595 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 PTPN12Q05209 780 aaKnown RBP10.48□□□□□ -0.73
CLDND1-229ENST00000513988 SCARF1Q14162 830 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 OTUD7BQ6GQQ9 843 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 AEBP1Q8IUX7 1158 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
CLDND1-229ENST00000513988 GJA8P48165 433 aa10.47□□□□□ -0.73
CLDND1-229ENST00000513988 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
CLDND1-229ENST00000513988 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
CLDND1-229ENST00000513988 RGL2O15211 777 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-229ENST00000513988 MTFR1Q15390 333 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 TJAP1Q5JTD0 557 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 PRAMEF18Q5VWM3 479 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 FAM109BQ6ICB4 259 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-229ENST00000513988 ARMC9Q7Z3E5 817 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 METRNQ9UJH8 293 aa10.46□□□□□ -0.73
CLDND1-229ENST00000513988 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-229ENST00000513988 ZNF646O15015 1829 aaPredicted RBP10.46□□□□□ -0.74
CLDND1-229ENST00000513988 NCOR1O75376 2440 aa10.46□□□□□ -0.74
CLDND1-229ENST00000513988 BDP1A6H8Y1 2624 aa10.46□□□□□ -0.74
CLDND1-229ENST00000513988 GJB1P08034 283 aa10.45□□□□□ -0.74
CLDND1-229ENST00000513988 DBNDD1Q9H9R9 158 aa10.45□□□□□ -0.74
CLDND1-229ENST00000513988 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
CLDND1-229ENST00000513988 SCAF8Q9UPN6 1271 aaKnown RBP10.45□□□□□ -0.74
CLDND1-229ENST00000513988 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
CLDND1-229ENST00000513988 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
CLDND1-229ENST00000513988 PRKG1Q13976 671 aa10.44□□□□□ -0.74
CLDND1-229ENST00000513988 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
CLDND1-229ENST00000513988 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
CLDND1-229ENST00000513988 ZBTB48P10074 688 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-229ENST00000513988 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
CLDND1-229ENST00000513988 ZNF790Q6PG37 636 aa10.43□□□□□ -0.74
CLDND1-229ENST00000513988 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
CLDND1-229ENST00000513988 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
CLDND1-229ENST00000513988 FMNL2Q96PY5 1086 aa10.43□□□□□ -0.74
CLDND1-229ENST00000513988 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms