RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 HDLBPQ00341 1268 aaKnown RBP7.07□□□□□ -1.28
NIPBL-207ENST00000513819 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-207ENST00000513819 PLAURQ03405 335 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 GRM2Q14416 872 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 DHX32Q7L7V1 743 aaKnown RBP7.07□□□□□ -1.28
NIPBL-207ENST00000513819 NCAPG2Q86XI2 1143 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 SUV39H2Q9H5I1 410 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 IGFLR1Q9H665 355 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 GIPC1O14908 333 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 TRPA1O75762 1119 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 EDN3P14138 238 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 SOX18P35713 384 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 HYAL2Q12891 473 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 NANOS1Q8WY41 292 aaKnown RBP7.06□□□□□ -1.28
NIPBL-207ENST00000513819 CRELD1Q96HD1 420 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 EHD4Q9H223 541 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
NIPBL-207ENST00000513819 ZBTB42B2RXF5 422 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 BMP4P12644 408 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 NEUROD1Q13562 356 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 MEI1Q5TIA1 1274 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 SYT9Q86SS6 491 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 ZKSCAN3Q9BRR0 538 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 FAM8A1Q9UBU6 413 aa7.05□□□□□ -1.28
NIPBL-207ENST00000513819 J3QW42 95 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 KIF4AO95239 1232 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 ZNF76P36508 570 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 PCBP4P57723 403 aaKnown RBP7.04□□□□□ -1.28
NIPBL-207ENST00000513819 FANCCQ00597 558 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 GAS6Q14393 721 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 OSMRQ99650 979 aa7.04□□□□□ -1.28
NIPBL-207ENST00000513819 HOXD8P13378 290 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 MX2P20592 715 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 NRLP54845 237 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 FCGRTP55899 365 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 GPLD1P80108 840 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 ZNF468Q5VIY5 522 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 GPR161Q8N6U8 529 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 CEP120Q8N960 986 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 RNF34Q969K3 372 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 HHIPQ96QV1 700 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 UBE2OQ9C0C9 1292 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
NIPBL-207ENST00000513819 METTL5Q9NRN9 209 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 DNAJB12Q9NXW2 375 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
NIPBL-207ENST00000513819 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 SIK1P57059 783 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 TRPM4Q8TD43 1214 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 TCF12Q99081 682 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 DZANK1Q9NVP4 752 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 TRAK1Q9UPV9 953 aa7.02□□□□□ -1.29
NIPBL-207ENST00000513819 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 METTL12A8MUP2 240 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 GSTT1P30711 240 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 ATP11AP98196 1134 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 RAD51AP2Q09MP3 1159 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
NIPBL-207ENST00000513819 ZNF775Q96BV0 537 aaPredicted RBP7.01□□□□□ -1.29
NIPBL-207ENST00000513819 RASSF4Q9H2L5 321 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
NIPBL-207ENST00000513819 H3BM21 787 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 NFKBIEO00221 500 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 SIN3BO75182 1162 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 CPB1P15086 417 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 EIF2AK2P19525 551 aaKnown RBP7□□□□□ -1.29
NIPBL-207ENST00000513819 PRPF40BQ6NWY9 871 aaKnown RBP7□□□□□ -1.29
NIPBL-207ENST00000513819 CCNJLQ8IV13 435 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 OXCT2Q9BYC2 517 aaPredicted RBP7□□□□□ -1.29
NIPBL-207ENST00000513819 TTF2Q9UNY4 1162 aaKnown RBP7□□□□□ -1.29
NIPBL-207ENST00000513819 AKAP2Q9Y2D5 859 aa7□□□□□ -1.29
NIPBL-207ENST00000513819 TMEM238LA0A1B0GVL6 79 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 GHRHP01286 108 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 GRIA4P48058 902 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 SPRED3Q2MJR0 410 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 DTHD1Q6ZMT9 781 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 MBIPQ9NS73 344 aa6.99□□□□□ -1.29
NIPBL-207ENST00000513819 NEURL1BA8MQ27 555 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-207ENST00000513819 ADH7P40394 386 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 ST13P50502 369 aaKnown RBP6.98□□□□□ -1.29
NIPBL-207ENST00000513819 ZC3H6P61129 1189 aaKnown RBP6.98□□□□□ -1.29
NIPBL-207ENST00000513819 ZNF394Q53GI3 561 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms