RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 COPS6Q7L5N1 327 aa15.85■□□□□ 0.13
PTPN20-229ENST00000513756 ZC3H12CQ9C0D7 883 aaKnown RBP15.85■□□□□ 0.13
PTPN20-229ENST00000513756 KCNQ5Q9NR82 932 aa15.85■□□□□ 0.13
PTPN20-229ENST00000513756 TAF1P21675 1872 aa15.84■□□□□ 0.13
PTPN20-229ENST00000513756 GPSM2P81274 684 aa15.84■□□□□ 0.13
PTPN20-229ENST00000513756 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
PTPN20-229ENST00000513756 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
PTPN20-229ENST00000513756 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
PTPN20-229ENST00000513756 PNNQ9H307 717 aaKnown RBP15.84■□□□□ 0.13
PTPN20-229ENST00000513756 PAPPA2Q9BXP8 1791 aa15.84■□□□□ 0.13
PTPN20-229ENST00000513756 GPR25O00155 361 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 ANXA1P04083 346 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 TM4SF4P48230 202 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 ZNF280AP59817 542 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-229ENST00000513756 SF3B3Q15393 1217 aaKnown RBP15.83■□□□□ 0.12
PTPN20-229ENST00000513756 HABP4Q5JVS0 413 aaKnown RBP15.83■□□□□ 0.12
PTPN20-229ENST00000513756 AGBL3Q8NEM8 1001 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 XAGE3Q8WTP9 111 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 CELF1Q92879 486 aaKnown RBP15.83■□□□□ 0.12
PTPN20-229ENST00000513756 PITPNM2Q9BZ72 1349 aa15.83■□□□□ 0.12
PTPN20-229ENST00000513756 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
PTPN20-229ENST00000513756 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
PTPN20-229ENST00000513756 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
PTPN20-229ENST00000513756 FKTNO75072 461 aa15.81■□□□□ 0.12
PTPN20-229ENST00000513756 SREBF2Q12772 1141 aa15.81■□□□□ 0.12
PTPN20-229ENST00000513756 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
PTPN20-229ENST00000513756 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
PTPN20-229ENST00000513756 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
PTPN20-229ENST00000513756 ZNF609O15014 1411 aa15.8■□□□□ 0.12
PTPN20-229ENST00000513756 UBE2Q2LH0YL09 131 aa15.8■□□□□ 0.12
PTPN20-229ENST00000513756 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
PTPN20-229ENST00000513756 TTLL12Q14166 644 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-229ENST00000513756 MYOZ2Q9NPC6 264 aa15.8■□□□□ 0.12
PTPN20-229ENST00000513756 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
PTPN20-229ENST00000513756 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 NF2P35240 595 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 INTS3Q68E01 1043 aaKnown RBP15.79■□□□□ 0.12
PTPN20-229ENST00000513756 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
PTPN20-229ENST00000513756 UFL1O94874 794 aa15.78■□□□□ 0.12
PTPN20-229ENST00000513756 MOB2Q70IA6 237 aa15.78■□□□□ 0.12
PTPN20-229ENST00000513756 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
PTPN20-229ENST00000513756 HSP90B1P14625 803 aaKnown RBP15.77■□□□□ 0.12
PTPN20-229ENST00000513756 PLBD2Q8NHP8 589 aa15.77■□□□□ 0.12
PTPN20-229ENST00000513756 ALDH1A1P00352 501 aa15.76■□□□□ 0.11
PTPN20-229ENST00000513756 ANKRD13DQ6ZTN6 518 aa15.76■□□□□ 0.11
PTPN20-229ENST00000513756 ZNF428Q96B54 188 aa15.76■□□□□ 0.11
PTPN20-229ENST00000513756 GMLQ99445 158 aa15.76■□□□□ 0.11
PTPN20-229ENST00000513756 ISCA1Q9BUE6 129 aa15.76■□□□□ 0.11
PTPN20-229ENST00000513756 MKI67P46013 3256 aaKnown RBP15.76■□□□□ 0.11
PTPN20-229ENST00000513756 USP17L3A6NCW0 530 aa15.75■□□□□ 0.11
PTPN20-229ENST00000513756 USP17L4A6NCW7 530 aa15.75■□□□□ 0.11
PTPN20-229ENST00000513756 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
PTPN20-229ENST00000513756 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
PTPN20-229ENST00000513756 USP17L1Q7RTZ2 530 aa15.75■□□□□ 0.11
PTPN20-229ENST00000513756 ARMC9Q7Z3E5 817 aa15.75■□□□□ 0.11
PTPN20-229ENST00000513756 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
PTPN20-229ENST00000513756 RIPK4P57078 832 aa15.74■□□□□ 0.11
PTPN20-229ENST00000513756 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
PTPN20-229ENST00000513756 PODNQ7Z5L7 613 aa15.74■□□□□ 0.11
PTPN20-229ENST00000513756 INHBEP58166 350 aa15.73■□□□□ 0.11
PTPN20-229ENST00000513756 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
PTPN20-229ENST00000513756 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
PTPN20-229ENST00000513756 PRAMEF18Q5VWM3 479 aa15.73■□□□□ 0.11
PTPN20-229ENST00000513756 OGFOD1Q8N543 542 aa15.73■□□□□ 0.11
PTPN20-229ENST00000513756 SCAF8Q9UPN6 1271 aaKnown RBP15.73■□□□□ 0.11
PTPN20-229ENST00000513756 TRIM17Q9Y577 477 aa15.73■□□□□ 0.11
PTPN20-229ENST00000513756 PSME4Q14997 1843 aa15.73■□□□□ 0.11
PTPN20-229ENST00000513756 MMP14P50281 582 aa15.72■□□□□ 0.11
PTPN20-229ENST00000513756 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
PTPN20-229ENST00000513756 R3HDMLQ9H3Y0 253 aa15.72■□□□□ 0.11
PTPN20-229ENST00000513756 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
PTPN20-229ENST00000513756 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 MANSC4A6NHS7 340 aaPredicted RBP15.71■□□□□ 0.11
PTPN20-229ENST00000513756 ATP2B4P23634 1241 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 FXR1P51114 621 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPN20-229ENST00000513756 PTPN12Q05209 780 aaKnown RBP15.71■□□□□ 0.11
PTPN20-229ENST00000513756 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 OTOP1Q7RTM1 612 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
PTPN20-229ENST00000513756 SEC31BQ9NQW1 1179 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 HTTP42858 3142 aa15.71■□□□□ 0.11
PTPN20-229ENST00000513756 XDHP47989 1333 aa15.7■□□□□ 0.1
PTPN20-229ENST00000513756 COL4A1P02462 1669 aa15.7■□□□□ 0.1
PTPN20-229ENST00000513756 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
PTPN20-229ENST00000513756 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
PTPN20-229ENST00000513756 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
PTPN20-229ENST00000513756 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
PTPN20-229ENST00000513756 MYO3BQ8WXR4 1341 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 WNT10BO00744 389 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 HOXB7P09629 217 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 APOBEC3FQ8IUX4 373 aaKnown RBP15.69■□□□□ 0.1
PTPN20-229ENST00000513756 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 HYPKQ9NX55 129 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 CENPFP49454 3210 aa15.69■□□□□ 0.1
PTPN20-229ENST00000513756 LDLRAD1Q5T700 205 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms