RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 TTLL7Q6ZT98 887 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 NGEFQ8N5V2 710 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 DPF3Q92784 378 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
PTPN20-228ENST00000513266 ECE2O60344 883 aa12.91□□□□□ -0.34
PTPN20-228ENST00000513266 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
PTPN20-228ENST00000513266 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTPN20-228ENST00000513266 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-228ENST00000513266 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
PTPN20-228ENST00000513266 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 SLC9C1Q4G0N8 1177 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
PTPN20-228ENST00000513266 COL4A1P02462 1669 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 PANK3Q9H999 370 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
PTPN20-228ENST00000513266 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
PTPN20-228ENST00000513266 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-228ENST00000513266 CRHR2Q13324 411 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 GRAPQ13588 217 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-228ENST00000513266 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
PTPN20-228ENST00000513266 INHBEP58166 350 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 SP3Q02447 781 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 Q7L0L9 218 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN20-228ENST00000513266 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
PTPN20-228ENST00000513266 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
PTPN20-228ENST00000513266 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-228ENST00000513266 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
PTPN20-228ENST00000513266 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
PTPN20-228ENST00000513266 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
PTPN20-228ENST00000513266 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
PTPN20-228ENST00000513266 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
PTPN20-228ENST00000513266 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
PTPN20-228ENST00000513266 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-228ENST00000513266 PRKG1Q13976 671 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 NBPF9Q3BBW0 867 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 PARP10Q53GL7 1025 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 GMLQ99445 158 aa12.85□□□□□ -0.35
PTPN20-228ENST00000513266 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
PTPN20-228ENST00000513266 NF2P35240 595 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 GPSM2P81274 684 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
PTPN20-228ENST00000513266 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 FZD1Q9UP38 647 aa12.84□□□□□ -0.35
PTPN20-228ENST00000513266 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
PTPN20-228ENST00000513266 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
PTPN20-228ENST00000513266 USP17L8P0C7I0 530 aa12.83□□□□□ -0.36
PTPN20-228ENST00000513266 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
PTPN20-228ENST00000513266 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.36
PTPN20-228ENST00000513266 HTATIP2Q9BUP3 242 aa12.83□□□□□ -0.36
PTPN20-228ENST00000513266 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
PTPN20-228ENST00000513266 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
PTPN20-228ENST00000513266 OTOFQ9HC10 1997 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 ZBTB48P10074 688 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-228ENST00000513266 MYL6BP14649 208 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 EYA3Q99504 573 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 PTPN18Q99952 460 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
PTPN20-228ENST00000513266 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 COL9A1P20849 921 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 MTFR1Q15390 333 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 MCM10Q7L590 875 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
PTPN20-228ENST00000513266 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
PTPN20-228ENST00000513266 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-228ENST00000513266 GJA5P36382 358 aa12.8□□□□□ -0.36
PTPN20-228ENST00000513266 ECM29Q5VYK3 1845 aa12.8□□□□□ -0.36
PTPN20-228ENST00000513266 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
PTPN20-228ENST00000513266 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
PTPN20-228ENST00000513266 WNT10BO00744 389 aa12.79□□□□□ -0.36
PTPN20-228ENST00000513266 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
PTPN20-228ENST00000513266 ZC3H12CQ9C0D7 883 aaKnown RBP12.79□□□□□ -0.36
PTPN20-228ENST00000513266 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
PTPN20-228ENST00000513266 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms