RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN20-226ENST00000513156 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
PTPN20-226ENST00000513156 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
PTPN20-226ENST00000513156 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
PTPN20-226ENST00000513156 MYL6BP14649 208 aa13.13□□□□□ -0.31
PTPN20-226ENST00000513156 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-226ENST00000513156 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-226ENST00000513156 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-226ENST00000513156 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
PTPN20-226ENST00000513156 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
PTPN20-226ENST00000513156 RAD17O75943 681 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 EGFRP00533 1210 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-226ENST00000513156 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
PTPN20-226ENST00000513156 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
PTPN20-226ENST00000513156 H0YGN5 161 aa13.11□□□□□ -0.31
PTPN20-226ENST00000513156 H7C1D1 291 aa13.11□□□□□ -0.31
PTPN20-226ENST00000513156 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-226ENST00000513156 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
PTPN20-226ENST00000513156 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
PTPN20-226ENST00000513156 FKTNO75072 461 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
PTPN20-226ENST00000513156 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
PTPN20-226ENST00000513156 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
PTPN20-226ENST00000513156 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
PTPN20-226ENST00000513156 YDJCA8MPS7 323 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-226ENST00000513156 TNIP1Q15025 636 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 PROSER3Q2NL68 480 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-226ENST00000513156 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
PTPN20-226ENST00000513156 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
PTPN20-226ENST00000513156 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
PTPN20-226ENST00000513156 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
PTPN20-226ENST00000513156 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
PTPN20-226ENST00000513156 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
PTPN20-226ENST00000513156 RTFDC1Q9BY42 306 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-226ENST00000513156 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
PTPN20-226ENST00000513156 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-226ENST00000513156 TAF1P21675 1872 aa13.08□□□□□ -0.32
PTPN20-226ENST00000513156 LAMB2P55268 1798 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 ANXA1P04083 346 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 TM4SF4P48230 202 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
PTPN20-226ENST00000513156 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
PTPN20-226ENST00000513156 HLFQ16534 295 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
PTPN20-226ENST00000513156 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 ZNF34Q8IZ26 560 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 DPF2Q92785 391 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
PTPN20-226ENST00000513156 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
PTPN20-226ENST00000513156 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 FLIIQ13045 1269 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PTPN20-226ENST00000513156 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
PTPN20-226ENST00000513156 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-226ENST00000513156 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
PTPN20-226ENST00000513156 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
PTPN20-226ENST00000513156 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
PTPN20-226ENST00000513156 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
PTPN20-226ENST00000513156 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
PTPN20-226ENST00000513156 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
PTPN20-226ENST00000513156 LAMB1P07942 1786 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 ANKRD36CQ5JPF3 1778 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 PSMD14O00487 310 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 FKBP1BP68106 108 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
PTPN20-226ENST00000513156 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-226ENST00000513156 PTPRCP08575 1304 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
PTPN20-226ENST00000513156 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
PTPN20-226ENST00000513156 RARSP54136 660 aaKnown RBP13.02□□□□□ -0.33
PTPN20-226ENST00000513156 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
PTPN20-226ENST00000513156 FKBP5Q13451 457 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms