RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ADM5C9JUS6 153 aa18.27■□□□□ 0.52
SPCS3-204ENST00000513139 ANXA1P04083 346 aa18.27■□□□□ 0.52
SPCS3-204ENST00000513139 SULF1Q8IWU6 871 aa18.27■□□□□ 0.52
SPCS3-204ENST00000513139 NSFL1CQ9UNZ2 370 aaKnown RBP18.27■□□□□ 0.52
SPCS3-204ENST00000513139 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
SPCS3-204ENST00000513139 SF3B3Q15393 1217 aaKnown RBP18.26■□□□□ 0.51
SPCS3-204ENST00000513139 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
SPCS3-204ENST00000513139 EYA3Q99504 573 aa18.26■□□□□ 0.51
SPCS3-204ENST00000513139 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
SPCS3-204ENST00000513139 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
SPCS3-204ENST00000513139 ECE2O60344 883 aa18.25■□□□□ 0.51
SPCS3-204ENST00000513139 AIMP1Q12904 312 aaKnown RBP18.25■□□□□ 0.51
SPCS3-204ENST00000513139 PKN2Q16513 984 aaKnown RBP18.25■□□□□ 0.51
SPCS3-204ENST00000513139 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
SPCS3-204ENST00000513139 RBM26Q5T8P6 1007 aaKnown RBP18.25■□□□□ 0.51
SPCS3-204ENST00000513139 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
SPCS3-204ENST00000513139 PAPPA2Q9BXP8 1791 aa18.25■□□□□ 0.51
SPCS3-204ENST00000513139 ZNF609O15014 1411 aa18.24■□□□□ 0.51
SPCS3-204ENST00000513139 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
SPCS3-204ENST00000513139 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
SPCS3-204ENST00000513139 FKBP1BP68106 108 aa18.24■□□□□ 0.51
SPCS3-204ENST00000513139 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
SPCS3-204ENST00000513139 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
SPCS3-204ENST00000513139 GGA3Q9NZ52 723 aa18.23■□□□□ 0.51
SPCS3-204ENST00000513139 GPSM2P81274 684 aa18.22■□□□□ 0.51
SPCS3-204ENST00000513139 RASAL3Q86YV0 1011 aa18.22■□□□□ 0.51
SPCS3-204ENST00000513139 CDCA5Q96FF9 252 aa18.22■□□□□ 0.51
SPCS3-204ENST00000513139 HPS5Q9UPZ3 1129 aa18.22■□□□□ 0.51
SPCS3-204ENST00000513139 DOK7Q18PE1 504 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 TBC1D16Q8TBP0 767 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 ZC3H12CQ9C0D7 883 aaKnown RBP18.21■□□□□ 0.51
SPCS3-204ENST00000513139 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 COL4A1P02462 1669 aa18.21■□□□□ 0.51
SPCS3-204ENST00000513139 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
SPCS3-204ENST00000513139 RIPK4P57078 832 aa18.2■□□□□ 0.5
SPCS3-204ENST00000513139 ZNF280AP59817 542 aaPredicted RBP18.2■□□□□ 0.5
SPCS3-204ENST00000513139 AGBL3Q8NEM8 1001 aa18.2■□□□□ 0.5
SPCS3-204ENST00000513139 FAM89AQ96GI7 184 aa18.2■□□□□ 0.5
SPCS3-204ENST00000513139 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
SPCS3-204ENST00000513139 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
SPCS3-204ENST00000513139 RPS8P62241 208 aaKnown RBP18.19■□□□□ 0.5
SPCS3-204ENST00000513139 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
SPCS3-204ENST00000513139 NOM1Q5C9Z4 860 aaKnown RBP18.19■□□□□ 0.5
SPCS3-204ENST00000513139 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
SPCS3-204ENST00000513139 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
SPCS3-204ENST00000513139 SCARF1Q14162 830 aa18.18■□□□□ 0.5
SPCS3-204ENST00000513139 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
SPCS3-204ENST00000513139 ASTN2O75129 1339 aaPredicted RBP18.18■□□□□ 0.5
SPCS3-204ENST00000513139 G3V3G9 751 aa18.17■□□□□ 0.5
SPCS3-204ENST00000513139 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
SPCS3-204ENST00000513139 RSBN1LQ6PCB5 846 aaPredicted RBP18.17■□□□□ 0.5
SPCS3-204ENST00000513139 HDAC9Q9UKV0 1011 aa18.17■□□□□ 0.5
SPCS3-204ENST00000513139 MKI67P46013 3256 aaKnown RBP18.16■□□□□ 0.5
SPCS3-204ENST00000513139 ZNF296Q8WUU4 475 aaPredicted RBP18.16■□□□□ 0.5
SPCS3-204ENST00000513139 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
SPCS3-204ENST00000513139 CHL1O00533 1208 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 IRS4O14654 1257 aaPredicted RBP18.15■□□□□ 0.5
SPCS3-204ENST00000513139 HOXB7P09629 217 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
SPCS3-204ENST00000513139 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
SPCS3-204ENST00000513139 TM4SF4P48230 202 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 GMLQ99445 158 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
SPCS3-204ENST00000513139 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
SPCS3-204ENST00000513139 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 UFL1O94874 794 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 USP17L8P0C7I0 530 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 HTTP42858 3142 aa18.14■□□□□ 0.49
SPCS3-204ENST00000513139 CENPFP49454 3210 aa18.13■□□□□ 0.49
SPCS3-204ENST00000513139 TBC1D8O95759 1140 aa18.13■□□□□ 0.49
SPCS3-204ENST00000513139 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
SPCS3-204ENST00000513139 FBXO46Q6PJ61 603 aaPredicted RBP18.13■□□□□ 0.49
SPCS3-204ENST00000513139 ZNF646O15015 1829 aaPredicted RBP18.12■□□□□ 0.49
SPCS3-204ENST00000513139 GPR25O00155 361 aa18.12■□□□□ 0.49
SPCS3-204ENST00000513139 KRT24Q2M2I5 525 aa18.12■□□□□ 0.49
SPCS3-204ENST00000513139 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
SPCS3-204ENST00000513139 CFHR5Q9BXR6 569 aa18.12■□□□□ 0.49
SPCS3-204ENST00000513139 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
SPCS3-204ENST00000513139 USP17L3A6NCW0 530 aa18.11■□□□□ 0.49
SPCS3-204ENST00000513139 USP17L4A6NCW7 530 aa18.11■□□□□ 0.49
SPCS3-204ENST00000513139 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
SPCS3-204ENST00000513139 USP17L1Q7RTZ2 530 aa18.11■□□□□ 0.49
SPCS3-204ENST00000513139 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
SPCS3-204ENST00000513139 MYH3P11055 1940 aa18.11■□□□□ 0.49
SPCS3-204ENST00000513139 LAMB1P07942 1786 aa18.1■□□□□ 0.49
SPCS3-204ENST00000513139 UBE2Q2LH0YL09 131 aa18.1■□□□□ 0.49
SPCS3-204ENST00000513139 MOB2Q70IA6 237 aa18.1■□□□□ 0.49
SPCS3-204ENST00000513139 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
SPCS3-204ENST00000513139 KIAA0100Q14667 2235 aaKnown RBP18.1■□□□□ 0.49
SPCS3-204ENST00000513139 RBBP6Q7Z6E9 1792 aaKnown RBP18.09■□□□□ 0.49
SPCS3-204ENST00000513139 XDHP47989 1333 aa18.09■□□□□ 0.49
SPCS3-204ENST00000513139 SREBF2Q12772 1141 aa18.09■□□□□ 0.49
SPCS3-204ENST00000513139 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
SPCS3-204ENST00000513139 FKTNO75072 461 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms