RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
DHFR-206ENST00000513048 GPR108Q9NPR9 543 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 TAF1P21675 1872 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 AOX1Q06278 1338 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 TNNI3KQ59H18 835 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 CLASRPQ8N2M8 674 aaKnown RBP11.51□□□□□ -0.57
DHFR-206ENST00000513048 VGLL2Q8N8G2 317 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 FPGT-TNNI3KV9GXZ4 949 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 ZNF609O15014 1411 aa11.51□□□□□ -0.57
DHFR-206ENST00000513048 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
DHFR-206ENST00000513048 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
DHFR-206ENST00000513048 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
DHFR-206ENST00000513048 AACSQ86V21 672 aa11.5□□□□□ -0.57
DHFR-206ENST00000513048 PI4K2BQ8TCG2 481 aa11.5□□□□□ -0.57
DHFR-206ENST00000513048 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■□□□ 13.6
DHFR-206ENST00000513048 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
DHFR-206ENST00000513048 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
DHFR-206ENST00000513048 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
DHFR-206ENST00000513048 MMP10P09238 476 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 CRY2Q49AN0 593 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 LDHAL6AQ6ZMR3 332 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
DHFR-206ENST00000513048 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
DHFR-206ENST00000513048 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
DHFR-206ENST00000513048 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
DHFR-206ENST00000513048 CELF1Q92879 486 aaKnown RBP11.48□□□□□ -0.57
DHFR-206ENST00000513048 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
DHFR-206ENST00000513048 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
DHFR-206ENST00000513048 ARAP2Q8WZ64 1704 aa11.48□□□□□ -0.57
DHFR-206ENST00000513048 MROH5Q6ZUA9 1318 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 IFIT2P09913 472 aaKnown RBP11.47□□□□□ -0.57
DHFR-206ENST00000513048 SDSP20132 328 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 FGFR2P21802 821 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 ST5P78524 1137 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 CDC5LQ99459 802 aaKnown RBP11.47□□□□□ -0.57
DHFR-206ENST00000513048 DBNDD2Q9BQY9 259 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 CNNM1Q9NRU3 951 aa11.47□□□□□ -0.57
DHFR-206ENST00000513048 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.57
DHFR-206ENST00000513048 A0A1B0GUL7 405 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 PDE8BO95263 885 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
DHFR-206ENST00000513048 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
DHFR-206ENST00000513048 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
DHFR-206ENST00000513048 TIMM10P62072 90 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 METTL24Q5JXM2 366 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 ANKRD18AQ8IVF6 992 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 BRIP1Q9BX63 1249 aa11.46□□□□□ -0.57
DHFR-206ENST00000513048 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
DHFR-206ENST00000513048 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
DHFR-206ENST00000513048 SEC24BO95487 1268 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 ATP5JP18859 108 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 ADORA1P30542 326 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 RPS8P62241 208 aaKnown RBP11.45□□□□□ -0.58
DHFR-206ENST00000513048 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 AKAP2Q9Y2D5 859 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
DHFR-206ENST00000513048 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 NPHP1O15259 732 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 CHRNDQ07001 517 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 GRAPQ13588 217 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 DDX46Q7L014 1031 aaKnown RBP11.44□□□□□ -0.58
DHFR-206ENST00000513048 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
DHFR-206ENST00000513048 GRAPLQ8TC17 118 aaPredicted RBP11.44□□□□□ -0.58
DHFR-206ENST00000513048 XAGE2Q96GT9 111 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 MINPP1Q9UNW1 487 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 AK9Q5TCS8 1911 aa11.44□□□□□ -0.58
DHFR-206ENST00000513048 ERC2O15083 957 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 CDC45O75419 566 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 TAF5LO75529 589 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 PUM3Q15397 648 aaKnown RBP11.43□□□□□ -0.58
DHFR-206ENST00000513048 TBC1D9Q6ZT07 1266 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 NEUROD6Q96NK8 337 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
DHFR-206ENST00000513048 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
DHFR-206ENST00000513048 SNAP23O00161 211 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 SRGNP10124 158 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.42□□□□□ -0.58
DHFR-206ENST00000513048 LPIN2Q92539 896 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
DHFR-206ENST00000513048 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 C10orf71Q711Q0 1435 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
DHFR-206ENST00000513048 MAP4K4O95819 1239 aaPredicted RBP11.41□□□□□ -0.58
DHFR-206ENST00000513048 PDE6BP35913 854 aa11.41□□□□□ -0.58
DHFR-206ENST00000513048 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 890.5 ms