RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 HFE2Q6ZVN8 426 aa9.59□□□□□ -0.87
CHD1-209ENST00000512844 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
CHD1-209ENST00000512844 RBCK1Q9BYM8 510 aa9.59□□□□□ -0.87
CHD1-209ENST00000512844 FAM177BA6PVY3 158 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 M0R082 166 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 LILRB5O75023 590 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 TNFRSF21O75509 655 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 PSAPL1Q6NUJ1 521 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 ZNF417Q8TAU3 575 aa9.58□□□□□ -0.88
CHD1-209ENST00000512844 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
CHD1-209ENST00000512844 JPH1Q9HDC5 661 aaPredicted RBP9.58□□□□□ -0.88
CHD1-209ENST00000512844 NUDT8Q8WV74 236 aa9.57□□□□□ -0.88
CHD1-209ENST00000512844 HOXD8P13378 290 aaPredicted RBP9.56□□□□□ -0.88
CHD1-209ENST00000512844 C1orf127Q8N9H9 656 aa9.56□□□□□ -0.88
CHD1-209ENST00000512844 FAM129BQ96TA1 746 aa9.56□□□□□ -0.88
CHD1-209ENST00000512844 FRRS1LQ9P0K9 344 aa9.56□□□□□ -0.88
CHD1-209ENST00000512844 KANSL3Q9P2N6 904 aa9.56□□□□□ -0.88
CHD1-209ENST00000512844 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
CHD1-209ENST00000512844 SPDYE3A6NKU9 549 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 J3QW42 95 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 ALBP02768 609 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 EDN3P14138 238 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 MDFIQ99750 246 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 SMG9Q9H0W8 520 aaKnown RBP9.55□□□□□ -0.88
CHD1-209ENST00000512844 CNTN3Q9P232 1028 aa9.55□□□□□ -0.88
CHD1-209ENST00000512844 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
CHD1-209ENST00000512844 ZBTB42B2RXF5 422 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 GNB5O14775 395 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 SMNDC1O75940 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD1-209ENST00000512844 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
CHD1-209ENST00000512844 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 TMC7Q7Z402 723 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 PLD4Q96BZ4 506 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 NIF3L1Q9GZT8 377 aa9.54□□□□□ -0.88
CHD1-209ENST00000512844 NOP53Q9NZM5 478 aaKnown RBP9.54□□□□□ -0.88
CHD1-209ENST00000512844 CPNE3O75131 537 aaKnown RBP9.53□□□□□ -0.88
CHD1-209ENST00000512844 DGKGP49619 791 aa9.53□□□□□ -0.88
CHD1-209ENST00000512844 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
CHD1-209ENST00000512844 NAGPAQ9UK23 515 aa9.53□□□□□ -0.88
CHD1-209ENST00000512844 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
CHD1-209ENST00000512844 ASB16Q96NS5 453 aa9.52□□□□□ -0.89
CHD1-209ENST00000512844 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
CHD1-209ENST00000512844 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
CHD1-209ENST00000512844 EREGO14944 169 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 GPR182O15218 404 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 KIF4AO95239 1232 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 SNRPNP63162 240 aaKnown RBP9.51□□□□□ -0.89
CHD1-209ENST00000512844 ALKBH8Q96BT7 664 aaKnown RBP9.51□□□□□ -0.89
CHD1-209ENST00000512844 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 DNAJC25Q9H1X3 360 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 PRDM6Q9NQX0 595 aa9.51□□□□□ -0.89
CHD1-209ENST00000512844 CEP135Q66GS9 1140 aa9.5□□□□□ -0.89
CHD1-209ENST00000512844 GDF6Q6KF10 455 aaPredicted RBP9.5□□□□□ -0.89
CHD1-209ENST00000512844 CACTIN-AS1Q8N1I8 211 aa9.5□□□□□ -0.89
CHD1-209ENST00000512844 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
CHD1-209ENST00000512844 CNTNAP5Q8WYK1 1306 aa9.5□□□□□ -0.89
CHD1-209ENST00000512844 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 ORC1Q13415 861 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
CHD1-209ENST00000512844 TMCO4Q5TGY1 634 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 TTC9Q92623 222 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
CHD1-209ENST00000512844 EIF1AYO14602 144 aaKnown RBP9.48□□□□□ -0.89
CHD1-209ENST00000512844 MAPK8P45983 427 aa9.48□□□□□ -0.89
CHD1-209ENST00000512844 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
CHD1-209ENST00000512844 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
CHD1-209ENST00000512844 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
CHD1-209ENST00000512844 PBX4Q9BYU1 374 aa9.48□□□□□ -0.89
CHD1-209ENST00000512844 TREHO43280 583 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 POLR3DP05423 398 aaPredicted RBP9.47□□□□□ -0.89
CHD1-209ENST00000512844 PTPRAP18433 802 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 IRS1P35568 1242 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
CHD1-209ENST00000512844 RAC1P63000 192 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 ATP11AP98196 1134 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 CEP120Q8N960 986 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 OSMRQ99650 979 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
CHD1-209ENST00000512844 PLVAPQ9BX97 442 aa9.46□□□□□ -0.9
CHD1-209ENST00000512844 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.9
CHD1-209ENST00000512844 PNMA6FA0A0J9YX94 578 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
CHD1-209ENST00000512844 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
CHD1-209ENST00000512844 CABP4P57796 275 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 FGD1P98174 961 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
CHD1-209ENST00000512844 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 GALNT12Q8IXK2 581 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 LACRTQ9GZZ8 138 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
CHD1-209ENST00000512844 ERCC3P19447 782 aa9.44□□□□□ -0.9
CHD1-209ENST00000512844 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
CHD1-209ENST00000512844 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
CHD1-209ENST00000512844 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
CHD1-209ENST00000512844 CCDC74AQ96AQ1 378 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms