RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 NFKBIEO00221 500 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 GNAI2P04899 355 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 TRIM27P14373 513 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 CASP7P55210 303 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 RASSF7Q02833 373 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 LDHAL6AQ6ZMR3 332 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 CELF1Q92879 486 aaKnown RBP9.32□□□□□ -0.92
NR1I3-231ENST00000512340 CLUAP1Q96AJ1 413 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 USP44Q9H0E7 712 aa9.32□□□□□ -0.92
NR1I3-231ENST00000512340 ZNF277Q9NRM2 450 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-231ENST00000512340 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
NR1I3-231ENST00000512340 NBPF7P0C2Y1 421 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-231ENST00000512340 FOXO4P98177 505 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 TNIP1Q15025 636 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-231ENST00000512340 SEC31BQ9NQW1 1179 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 DDX19BQ9UMR2 479 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 CACNA1SQ13698 1873 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
NR1I3-231ENST00000512340 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
NR1I3-231ENST00000512340 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 UFL1O94874 794 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-231ENST00000512340 PRELPP51888 382 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 KIAA2012Q0VF49 1180 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 RABL6Q3YEC7 729 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-231ENST00000512340 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
NR1I3-231ENST00000512340 BICC1Q9H694 974 aaKnown RBP9.3□□□□□ -0.92
NR1I3-231ENST00000512340 GLTPD2A6NH11 291 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 GPSM2P81274 684 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 SMC1BQ8NDV3 1235 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 ZNRF3Q9ULT6 936 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 MINPP1Q9UNW1 487 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 FER1L6Q2WGJ9 1857 aa9.29□□□□□ -0.92
NR1I3-231ENST00000512340 PCNTO95613 3336 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 HMMRO75330 724 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-231ENST00000512340 AOC3Q16853 763 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 METTL24Q5JXM2 366 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 OLFM4Q6UX06 510 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 VPS37DQ86XT2 251 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 GPC2Q8N158 579 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 TMEM57Q8N5G2 664 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 TBC1D16Q8TBP0 767 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
NR1I3-231ENST00000512340 SBF1O95248 1867 aa9.28□□□□□ -0.92
NR1I3-231ENST00000512340 FZD9O00144 591 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 SRGAP3O43295 1099 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 PLIN1O60240 522 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 CHRNDQ07001 517 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 G3BP1Q13283 466 aaKnown RBP eCLIP9.27□□□□□ -0.93
NR1I3-231ENST00000512340 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-231ENST00000512340 MVPQ14764 893 aaKnown RBP9.27□□□□□ -0.93
NR1I3-231ENST00000512340 HSP90AB4PQ58FF6 505 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 ZNF804AQ7Z570 1209 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 MEIS3Q99687 375 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 COA1Q9GZY4 146 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 NMRK2Q9NPI5 230 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 ZNF804BA4D1E1 1349 aa9.27□□□□□ -0.93
NR1I3-231ENST00000512340 MED23Q9ULK4 1368 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 CCDC88AQ3V6T2 1871 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 EYA2O00167 538 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 CIAO1O76071 339 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 IFIT1P09914 478 aaKnown RBP9.26□□□□□ -0.93
NR1I3-231ENST00000512340 IL15P40933 162 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-231ENST00000512340 MMP14P50281 582 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 UBE4AQ14139 1066 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 EPHA10Q5JZY3 1008 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-231ENST00000512340 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 POLLQ9UGP5 575 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 AKAP2Q9Y2D5 859 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
NR1I3-231ENST00000512340 DICER1Q9UPY3 1922 aaKnown RBP9.26□□□□□ -0.93
NR1I3-231ENST00000512340 H7C1D1 291 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 ECE2O60344 883 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 FRAT2O75474 233 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 SLC5A1P13866 664 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 RPS12P25398 132 aaKnown RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 MTX1Q13505 466 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 AAMPQ13685 434 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 PUM3Q15397 648 aaKnown RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 COL13A1Q5TAT6 717 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 RPAP2Q8IXW5 612 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 KAZALD1Q96I82 304 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-231ENST00000512340 GNL3LQ9NVN8 582 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms