RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 PHLDB1Q86UU1 1377 aa7.88□□□□□ -1.15
MSH3-202ENST00000512258 KIF13AQ9H1H9 1805 aa7.88□□□□□ -1.15
MSH3-202ENST00000512258 ABL2P42684 1182 aa7.88□□□□□ -1.15
MSH3-202ENST00000512258 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
MSH3-202ENST00000512258 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
MSH3-202ENST00000512258 OAS3Q9Y6K5 1087 aaKnown RBP7.88□□□□□ -1.15
MSH3-202ENST00000512258 SUPT6HQ7KZ85 1726 aaKnown RBP7.88□□□□□ -1.15
MSH3-202ENST00000512258 ABCA9Q8IUA7 1624 aa7.88□□□□□ -1.15
MSH3-202ENST00000512258 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
MSH3-202ENST00000512258 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
MSH3-202ENST00000512258 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.87□□□□□ -1.15
MSH3-202ENST00000512258 GLI2P10070 1586 aa7.87□□□□□ -1.15
MSH3-202ENST00000512258 ZBTB42B2RXF5 422 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 DLL1O00548 723 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 C21orf2O43822 256 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
MSH3-202ENST00000512258 NFKB1P19838 968 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 DEPDC4Q8N2C3 294 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 GPATCH8Q9UKJ3 1502 aaKnown RBP7.86□□□□□ -1.15
MSH3-202ENST00000512258 CDC42BPAQ5VT25 1732 aa7.86□□□□□ -1.15
MSH3-202ENST00000512258 CCNB3Q8WWL7 1395 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 MAP3K4Q9Y6R4 1608 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 KIAA1324LA8MWY0 1029 aaPredicted RBP7.85□□□□□ -1.15
MSH3-202ENST00000512258 IRAK1P51617 712 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 FAM35AQ86V20 835 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 TPCN2Q8NHX9 752 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 ALG2Q9H553 416 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 CD109Q6YHK3 1445 aa7.85□□□□□ -1.15
MSH3-202ENST00000512258 ZNF644Q9H582 1327 aaPredicted RBP7.84□□□□□ -1.15
MSH3-202ENST00000512258 CDC42BPBQ9Y5S2 1711 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 TSPOAP1O95153 1857 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 PPRC1Q5VV67 1664 aaKnown RBP7.84□□□□□ -1.15
MSH3-202ENST00000512258 CPB1P15086 417 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 CLDN10P78369 228 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 KRTAP4-9Q9BYQ8 210 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 DMGDHQ9UI17 866 aaKnown RBP7.84□□□□□ -1.15
MSH3-202ENST00000512258 PREX2Q70Z35 1606 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 PLCH2O75038 1416 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 MYOM3Q5VTT5 1437 aa7.84□□□□□ -1.15
MSH3-202ENST00000512258 MYO5CQ9NQX4 1742 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 USP17L5A8MUK1 530 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 ADAMTS4O75173 837 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 ALX3O95076 343 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 CCINQ13939 588 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 TTC9Q92623 222 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
MSH3-202ENST00000512258 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 ARHGAP5Q13017 1502 aa7.83□□□□□ -1.16
MSH3-202ENST00000512258 CCDC102BQ68D86 513 aa7.82□□□□□ -1.16
MSH3-202ENST00000512258 Q6ZS46 218 aa7.82□□□□□ -1.16
MSH3-202ENST00000512258 FGD6Q6ZV73 1430 aa7.82□□□□□ -1.16
MSH3-202ENST00000512258 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
MSH3-202ENST00000512258 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
MSH3-202ENST00000512258 CFDP1Q9UEE9 299 aaPredicted RBP7.82□□□□□ -1.16
MSH3-202ENST00000512258 SAMD9LQ8IVG5 1584 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 M0R2N6 131 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 DKK1O94907 266 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 MAP3K6O95382 1288 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 GP2P55259 537 aaKnown RBP7.81□□□□□ -1.16
MSH3-202ENST00000512258 FZD5Q13467 585 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 IER5Q5VY09 327 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 TMEM130Q8N3G9 435 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
MSH3-202ENST00000512258 AKTIPQ9H8T0 292 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 ITSN2Q9NZM3 1697 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 FANCAO15360 1455 aa7.81□□□□□ -1.16
MSH3-202ENST00000512258 ARHGEF12Q9NZN5 1544 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 F8W735 103 aaPredicted RBP7.8□□□□□ -1.16
MSH3-202ENST00000512258 TGFB1P01137 390 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 TSEN2Q8NCE0 465 aaKnown RBP7.8□□□□□ -1.16
MSH3-202ENST00000512258 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 RNF114Q9Y508 228 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 PTPN23Q9H3S7 1636 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 CAMSAP2Q08AD1 1489 aa7.8□□□□□ -1.16
MSH3-202ENST00000512258 AKNAQ7Z591 1439 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 MIA2Q96PC5 1412 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
MSH3-202ENST00000512258 HNRNPMP52272 730 aaKnown RBP eCLIP7.79□□□□□ -1.16
MSH3-202ENST00000512258 FAM50AQ14320 339 aaKnown RBP7.79□□□□□ -1.16
MSH3-202ENST00000512258 EFCAB2Q5VUJ9 269 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 STAG2Q8N3U4 1231 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 CHMP3Q9Y3E7 222 aa7.79□□□□□ -1.16
MSH3-202ENST00000512258 RRBP1Q9P2E9 1410 aaKnown RBP7.78□□□□□ -1.16
MSH3-202ENST00000512258 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
MSH3-202ENST00000512258 SPINK2P20155 84 aa7.78□□□□□ -1.16
MSH3-202ENST00000512258 GPLD1P80108 840 aa7.78□□□□□ -1.16
MSH3-202ENST00000512258 DHX32Q7L7V1 743 aaKnown RBP7.78□□□□□ -1.16
MSH3-202ENST00000512258 TRIM50Q86XT4 487 aa7.78□□□□□ -1.16
MSH3-202ENST00000512258 TCOF1Q13428 1488 aaKnown RBP7.78□□□□□ -1.16
MSH3-202ENST00000512258 ABCC1P33527 1531 aa7.78□□□□□ -1.16
MSH3-202ENST00000512258 ADGRL1O94910 1474 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 TEX14Q8IWB6 1497 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 NEO1Q92859 1461 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 MBD5Q9P267 1494 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 TGFBR3LH3BV60 316 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms