RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 FAM198AQ9UFP1 575 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 ZBTB1Q9Y2K1 713 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 ZNF831Q5JPB2 1677 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 MAP3K15Q6ZN16 1313 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 ANKRD36CQ5JPF3 1778 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 TRIM6-TRIM34B2RNG4 842 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 KCNQ2O43526 872 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 SURF6O75683 361 aaKnown RBP9.97□□□□□ -0.81
HTT-209ENST00000512068 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 CRKLP46109 303 aaKnown RBP9.97□□□□□ -0.81
HTT-209ENST00000512068 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
HTT-209ENST00000512068 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 DZIP3Q86Y13 1208 aaKnown RBP9.97□□□□□ -0.81
HTT-209ENST00000512068 ERC1Q8IUD2 1116 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 ZBED2Q9BTP6 218 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 LRRCC1Q9C099 1032 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 UPF2Q9HAU5 1272 aaKnown RBP9.97□□□□□ -0.81
HTT-209ENST00000512068 EXOC6BQ9Y2D4 811 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 SBF2Q86WG5 1849 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 UTYO14607 1347 aa9.97□□□□□ -0.81
HTT-209ENST00000512068 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
HTT-209ENST00000512068 TCIRG1Q13488 830 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 FAM196AQ6ZSG2 479 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
HTT-209ENST00000512068 SSH3Q8TE77 659 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 SUCLG2Q96I99 432 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 ZNF652Q9Y2D9 606 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.82
HTT-209ENST00000512068 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
HTT-209ENST00000512068 ERVV-1B6SEH8 477 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
HTT-209ENST00000512068 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.82
HTT-209ENST00000512068 GIGYF2Q6Y7W6 1299 aaKnown RBP9.95□□□□□ -0.82
HTT-209ENST00000512068 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 KIF1BPQ96EK5 621 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 BICC1Q9H694 974 aaKnown RBP9.95□□□□□ -0.82
HTT-209ENST00000512068 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
HTT-209ENST00000512068 RBM19Q9Y4C8 960 aaKnown RBP9.95□□□□□ -0.82
HTT-209ENST00000512068 NUP98P52948 1817 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 BRWD3Q6RI45 1802 aa9.95□□□□□ -0.82
HTT-209ENST00000512068 RREB1Q92766 1687 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 COL15A1P39059 1388 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 HSP90B1P14625 803 aaKnown RBP9.94□□□□□ -0.82
HTT-209ENST00000512068 MTX1Q13505 466 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 PHOX2BQ99453 314 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
HTT-209ENST00000512068 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
HTT-209ENST00000512068 RXRBP28702 533 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 ITPK1Q13572 414 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 RBM46Q8TBY0 533 aaKnown RBP9.93□□□□□ -0.82
HTT-209ENST00000512068 FBXO41Q8TF61 875 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 LY75O60449 1722 aa9.93□□□□□ -0.82
HTT-209ENST00000512068 MYH14Q7Z406 1995 aaKnown RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 MYH3P11055 1940 aa9.92□□□□□ -0.82
HTT-209ENST00000512068 H7C1W4 665 aa9.92□□□□□ -0.82
HTT-209ENST00000512068 PCCAP05165 728 aaPredicted RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 GPTP24298 496 aa9.92□□□□□ -0.82
HTT-209ENST00000512068 EIF5P55010 431 aaKnown RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 BMP2KLQ5H9B9 411 aa9.92□□□□□ -0.82
HTT-209ENST00000512068 TAF7LQ5H9L4 462 aa9.92□□□□□ -0.82
HTT-209ENST00000512068 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 INTS5Q6P9B9 1019 aaKnown RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 CLASRPQ8N2M8 674 aaKnown RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 ZBTB38Q8NAP3 1195 aaPredicted RBP9.92□□□□□ -0.82
HTT-209ENST00000512068 ZPR1O75312 459 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 MX1P20591 662 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 PARP10Q53GL7 1025 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
HTT-209ENST00000512068 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 RHPN1Q8TCX5 695 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 JARID2Q92833 1246 aaPredicted RBP9.91□□□□□ -0.82
HTT-209ENST00000512068 TATDN2Q93075 761 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 TRMT112Q9UI30 125 aaKnown RBP9.91□□□□□ -0.82
HTT-209ENST00000512068 NOP58Q9Y2X3 529 aaKnown RBP9.91□□□□□ -0.82
HTT-209ENST00000512068 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
HTT-209ENST00000512068 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
HTT-209ENST00000512068 C3orf80F5H4A9 247 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 IFIT2P09913 472 aaKnown RBP9.9□□□□□ -0.82
HTT-209ENST00000512068 HLFQ16534 295 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 CCDC57Q2TAC2 916 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 TTC22Q5TAA0 569 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms