RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GEMIN8Q9NWZ8 242 aaKnown RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 NLRP2Q9NX02 1062 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 ANAPC4Q9UJX5 808 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 NHSL1Q5SYE7 1610 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 KIF1AQ12756 1690 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 ITSN1Q15811 1721 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 POLR3AO14802 1390 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 RNASEH2AO75792 299 aaKnown RBP6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 ATICP31939 592 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 RAPGEF1Q13905 1077 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CHRNA2Q15822 529 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CHCHD4Q8N4Q1 142 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC89Q8N998 374 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 TMEM87AQ8NBN3 555 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 NGLY1Q96IV0 654 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 PANK3Q9H999 370 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 USP6P35125 1406 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 TNS3Q68CZ2 1445 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 TOPAZ1Q8N9V7 1692 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 TBX3O15119 743 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CLK2P49760 499 aaKnown RBP6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 CAMK2BQ13554 666 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 FAM161BQ96MY7 647 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 SLC45A1Q9Y2W3 748 aa6.07□□□□□ -1.44
TRAPPC11-208ENST00000511955 TTC21BQ7Z4L5 1316 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 IPO8O15397 1037 aaKnown RBP6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 BPNT1O95861 308 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 TRAPPC10P48553 1259 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 VAC14Q08AM6 782 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 DUSP27Q5VZP5 1158 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 LARP1BQ659C4 914 aaKnown RBP6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 USP48Q86UV5 1035 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 CARD14Q9BXL6 1004 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 RETREG1Q9H6L5 497 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 MAFBQ9Y5Q3 323 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 LRP6O75581 1613 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 CD163L1Q9NR16 1453 aa6.06□□□□□ -1.44
TRAPPC11-208ENST00000511955 PES1O00541 588 aaKnown RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 COL6A1P12109 1028 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 MAPK1P28482 360 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 RGS3P49796 1198 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 MFSD10Q14728 455 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 ARMC3Q5W041 872 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC70Q6NSX1 233 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 TGIF2Q9GZN2 237 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PRM3Q9NNZ6 103 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PCDH10Q9P2E7 1040 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 SYNRGQ9UMZ2 1314 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 ARHGEF10O15013 1369 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 CPSF1Q10570 1443 aaKnown RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 NSD3Q9BZ95 1437 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 KRT18P05783 430 aaKnown RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 RBP3P10745 1247 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PEX19P40855 299 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 DDX10Q13206 875 aaKnown RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 CDC37Q16543 378 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 SLFNL1Q499Z3 407 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 NLRP13Q86W25 1043 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PIP4P2Q8N4L2 257 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 MRFAP1L1Q96HT8 127 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 APBA2Q99767 749 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PRDM11Q9NQV5 511 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 RAI14Q9P0K7 980 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 SPATA31A6Q5VVP1 1343 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 ANKRD36BQ8N2N9 1353 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC7Q96M83 1385 aa6.05□□□□□ -1.44
TRAPPC11-208ENST00000511955 PRSS47A8MTI9 375 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 VGLL3A8MV65 326 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 DPYSL4O14531 572 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SLC26A4O43511 780 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 GCP02774 474 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 NAT1P18440 290 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SLC4A8Q2Y0W8 1093 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 UVSSAQ2YD98 709 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 TMEM259Q4ZIN3 620 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 FAM43AQ8N2R8 423 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 ERP27Q96DN0 273 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 STRN4Q9NRL3 753 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 ASAP1Q9ULH1 1129 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SMC3Q9UQE7 1217 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 EP400Q96L91 3159 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SBNO1A3KN83 1393 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 KIAA0232Q92628 1395 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 XRCC5P13010 732 aaKnown RBP6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SSTR3P32745 418 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 MDM2Q00987 491 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 GNL2Q13823 731 aaKnown RBP6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 SAMD3Q8N6K7 520 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 ACRBPQ8NEB7 543 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC34Q96HJ3 373 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 ANO2Q9NQ90 1003 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 EVLQ9UI08 416 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 KNSTRNQ9Y448 316 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms