RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 COL4A5P29400 1685 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 XDHP47989 1333 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 DDNO94850 711 aaPredicted RBP15.71■□□□□ 0.11
PTCD2-209ENST00000511752 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
PTCD2-209ENST00000511752 CCDC57Q2TAC2 916 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 EPHA10Q5JZY3 1008 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
PTCD2-209ENST00000511752 UFL1O94874 794 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 ZNRF3Q9ULT6 936 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
PTCD2-209ENST00000511752 TOMM70O94826 608 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 C1QTNF8P60827 252 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 TAF7LQ5H9L4 462 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 GPC2Q8N158 579 aa15.69■□□□□ 0.1
PTCD2-209ENST00000511752 ZC3H12CQ9C0D7 883 aaKnown RBP15.69■□□□□ 0.1
PTCD2-209ENST00000511752 SCN4AP35499 1836 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 G3V3G9 751 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-209ENST00000511752 TRIM27P14373 513 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
PTCD2-209ENST00000511752 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-209ENST00000511752 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
PTCD2-209ENST00000511752 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
PTCD2-209ENST00000511752 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
PTCD2-209ENST00000511752 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
PTCD2-209ENST00000511752 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PTCD2-209ENST00000511752 TNIP1Q15025 636 aa15.66■□□□□ 0.1
PTCD2-209ENST00000511752 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
PTCD2-209ENST00000511752 ANKRD44Q8N8A2 993 aa15.66■□□□□ 0.1
PTCD2-209ENST00000511752 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
PTCD2-209ENST00000511752 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
PTCD2-209ENST00000511752 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
PTCD2-209ENST00000511752 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 POTECB2RU33 542 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 ECE2O60344 883 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 GNAI3P08754 354 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-209ENST00000511752 CHRNDQ07001 517 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 CXCL9Q07325 125 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 RBM46Q8TBY0 533 aaKnown RBP15.65■□□□□ 0.1
PTCD2-209ENST00000511752 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-209ENST00000511752 DBNDD1Q9H9R9 158 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 HACL1Q9UJ83 578 aa15.65■□□□□ 0.1
PTCD2-209ENST00000511752 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
PTCD2-209ENST00000511752 RAD17O75943 681 aa15.64■□□□□ 0.09
PTCD2-209ENST00000511752 KCNJ4P48050 445 aa15.64■□□□□ 0.09
PTCD2-209ENST00000511752 DOK7Q18PE1 504 aa15.64■□□□□ 0.09
PTCD2-209ENST00000511752 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
PTCD2-209ENST00000511752 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
PTCD2-209ENST00000511752 YDJCA8MPS7 323 aa15.63■□□□□ 0.09
PTCD2-209ENST00000511752 MEIS3Q99687 375 aa15.63■□□□□ 0.09
PTCD2-209ENST00000511752 TNNQ9UQP3 1299 aa15.63■□□□□ 0.09
PTCD2-209ENST00000511752 LRRFIP2Q9Y608 721 aaKnown RBP15.63■□□□□ 0.09
PTCD2-209ENST00000511752 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
PTCD2-209ENST00000511752 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
PTCD2-209ENST00000511752 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-209ENST00000511752 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-209ENST00000511752 PLIN1O60240 522 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 TAF5LO75529 589 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 EPHX2P34913 555 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 FSTL1Q12841 308 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 PNMA8AQ86V59 439 aaPredicted RBP15.61■□□□□ 0.09
PTCD2-209ENST00000511752 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 RCAN3Q9UKA8 241 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 MROH5Q6ZUA9 1318 aa15.61■□□□□ 0.09
PTCD2-209ENST00000511752 PSME4Q14997 1843 aa15.6■□□□□ 0.09
PTCD2-209ENST00000511752 WTIPA6NIX2 430 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-209ENST00000511752 PSMD14O00487 310 aa15.6■□□□□ 0.09
PTCD2-209ENST00000511752 MS4A1P11836 297 aa15.6■□□□□ 0.09
PTCD2-209ENST00000511752 SCNN1DP51172 638 aa15.6■□□□□ 0.09
PTCD2-209ENST00000511752 PUS3Q9BZE2 481 aaKnown RBP15.6■□□□□ 0.09
PTCD2-209ENST00000511752 SCN9AQ15858 1988 aa15.59■□□□□ 0.09
PTCD2-209ENST00000511752 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-209ENST00000511752 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-209ENST00000511752 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
PTCD2-209ENST00000511752 COA1Q9GZY4 146 aa15.59■□□□□ 0.09
PTCD2-209ENST00000511752 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
PTCD2-209ENST00000511752 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
PTCD2-209ENST00000511752 GNAI2P04899 355 aa15.58■□□□□ 0.08
PTCD2-209ENST00000511752 RPS12P25398 132 aaKnown RBP15.58■□□□□ 0.08
PTCD2-209ENST00000511752 EPS15P42566 896 aa15.58■□□□□ 0.08
PTCD2-209ENST00000511752 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
PTCD2-209ENST00000511752 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
PTCD2-209ENST00000511752 C15orf52Q6ZUT6 534 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms