RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 HAUS7Q99871 368 aa18.47■□□□□ 0.55
SCLT1-209ENST00000511426 RAD50Q92878 1312 aa18.47■□□□□ 0.55
SCLT1-209ENST00000511426 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
SCLT1-209ENST00000511426 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
SCLT1-209ENST00000511426 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
SCLT1-209ENST00000511426 AK9Q5TCS8 1911 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 TM4SF1P30408 202 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 LPIN2Q92539 896 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
SCLT1-209ENST00000511426 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
SCLT1-209ENST00000511426 DIAPH3Q9NSV4 1193 aa18.45■□□□□ 0.54
SCLT1-209ENST00000511426 BSDC1Q9NW68 430 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-209ENST00000511426 NPHP1O15259 732 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 TIMM10P62072 90 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 ST5P78524 1137 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
SCLT1-209ENST00000511426 SMIM5Q71RC9 77 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 ARAP2Q8WZ64 1704 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 SGSM2O43147 1006 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 BECN1Q14457 450 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
SCLT1-209ENST00000511426 FGFR2P21802 821 aa18.43■□□□□ 0.54
SCLT1-209ENST00000511426 MCCP23508 829 aa18.43■□□□□ 0.54
SCLT1-209ENST00000511426 SEC31BQ9NQW1 1179 aa18.43■□□□□ 0.54
SCLT1-209ENST00000511426 SNRKQ9NRH2 765 aa18.43■□□□□ 0.54
SCLT1-209ENST00000511426 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
SCLT1-209ENST00000511426 UQCRFS1P1P0C7P4 283 aa18.42■□□□□ 0.54
SCLT1-209ENST00000511426 SLC5A1P13866 664 aa18.42■□□□□ 0.54
SCLT1-209ENST00000511426 ZNF827Q17R98 1081 aa18.42■□□□□ 0.54
SCLT1-209ENST00000511426 QSER1Q2KHR3 1735 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
SCLT1-209ENST00000511426 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
SCLT1-209ENST00000511426 KBTBD3Q8NAB2 608 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
SCLT1-209ENST00000511426 SERPINB2P05120 415 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 BAG6P46379 1132 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 ANAPC15P60006 121 aa18.41■□□□□ 0.54
SCLT1-209ENST00000511426 ZBTB22O15209 634 aa18.4■□□□□ 0.54
SCLT1-209ENST00000511426 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
SCLT1-209ENST00000511426 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
SCLT1-209ENST00000511426 IL17RAQ96F46 866 aa18.4■□□□□ 0.54
SCLT1-209ENST00000511426 PAG1Q9NWQ8 432 aa18.4■□□□□ 0.54
SCLT1-209ENST00000511426 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-209ENST00000511426 CASZ1Q86V15 1759 aa18.39■□□□□ 0.54
SCLT1-209ENST00000511426 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
SCLT1-209ENST00000511426 CRY2Q49AN0 593 aa18.39■□□□□ 0.53
SCLT1-209ENST00000511426 KIAA1211Q6ZU35 1233 aa18.39■□□□□ 0.53
SCLT1-209ENST00000511426 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
SCLT1-209ENST00000511426 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
SCLT1-209ENST00000511426 ARID4AP29374 1257 aaPredicted RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 CHRNDQ07001 517 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 TTF1Q15361 905 aaPredicted RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 COL23A1Q86Y22 540 aaPredicted RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 KLRG2A4D1S0 409 aaPredicted RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 ZFYP08048 801 aaPredicted RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 RABEP1Q15276 862 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 SNX21Q969T3 373 aa18.38■□□□□ 0.53
SCLT1-209ENST00000511426 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
SCLT1-209ENST00000511426 EP400Q96L91 3159 aa18.37■□□□□ 0.53
SCLT1-209ENST00000511426 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
SCLT1-209ENST00000511426 GRAPQ13588 217 aa18.37■□□□□ 0.53
SCLT1-209ENST00000511426 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
SCLT1-209ENST00000511426 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
SCLT1-209ENST00000511426 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
SCLT1-209ENST00000511426 STK32BQ9NY57 414 aa18.37■□□□□ 0.53
SCLT1-209ENST00000511426 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
SCLT1-209ENST00000511426 ADORA1P30542 326 aa18.36■□□□□ 0.53
SCLT1-209ENST00000511426 SLC15A2Q16348 729 aa18.36■□□□□ 0.53
SCLT1-209ENST00000511426 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
SCLT1-209ENST00000511426 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
SCLT1-209ENST00000511426 DDR1Q08345 913 aa18.35■□□□□ 0.53
SCLT1-209ENST00000511426 CCDC102BQ68D86 513 aa18.35■□□□□ 0.53
SCLT1-209ENST00000511426 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
SCLT1-209ENST00000511426 GOLIM4O00461 696 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 KIF2CQ99661 725 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 HELLSQ9NRZ9 838 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 CRAMP1Q96RY5 1269 aa18.34■□□□□ 0.53
SCLT1-209ENST00000511426 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
SCLT1-209ENST00000511426 IGSF3O75054 1194 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms