RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
SMAD1-209ENST00000511125 FPGT-TNNI3KV9GXZ4 949 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 RAB11FIP3O75154 756 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 IL15P40933 162 aaPredicted RBP9.89□□□□□ -0.83
SMAD1-209ENST00000511125 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMAD1-209ENST00000511125 CDC5LQ99459 802 aaKnown RBP9.89□□□□□ -0.83
SMAD1-209ENST00000511125 RIPOR2Q9Y4F9 1068 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 COL4A1P02462 1669 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 GSPT1P15170 499 aaKnown RBP9.88□□□□□ -0.83
SMAD1-209ENST00000511125 GYG1P46976 350 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 ATP2B3Q16720 1220 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 MINPP1Q9UNW1 487 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 C6orf229H3BNL8 230 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 FRAT2O75474 233 aaPredicted RBP9.88□□□□□ -0.83
SMAD1-209ENST00000511125 BCAMP50895 628 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 SF3B3Q15393 1217 aaKnown RBP9.88□□□□□ -0.83
SMAD1-209ENST00000511125 SLC10A5Q5PT55 438 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 ERC1Q8IUD2 1116 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 XAGE2Q96GT9 111 aa9.88□□□□□ -0.83
SMAD1-209ENST00000511125 H0YIN7 160 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 SEC24BO95487 1268 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 POLD1P28340 1107 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 TXNRD3Q86VQ6 643 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 FBXW7Q969H0 707 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 BRIP1Q9BX63 1249 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 C21orf2O43822 256 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 PDE8BO95263 885 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 HSP90B1P14625 803 aaKnown RBP9.87□□□□□ -0.83
SMAD1-209ENST00000511125 DPEP1P16444 411 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 SCARF1Q14162 830 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
SMAD1-209ENST00000511125 RBM17Q96I25 401 aaKnown RBP9.87□□□□□ -0.83
SMAD1-209ENST00000511125 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 SRGNP10124 158 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 SDSP20132 328 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 PHKA1P46020 1223 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 VPS37DQ86XT2 251 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 CHAF1AQ13111 956 aaPredicted RBP9.86□□□□□ -0.83
SMAD1-209ENST00000511125 TTC39AQ5SRH9 613 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 ANTXR1Q9H6X2 564 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 RREB1Q92766 1687 aa9.86□□□□□ -0.83
SMAD1-209ENST00000511125 GOLIM4O00461 696 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 PDE6BP35913 854 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 MFAP1P55081 439 aaKnown RBP9.85□□□□□ -0.83
SMAD1-209ENST00000511125 GRAPQ13588 217 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 GRAPLQ8TC17 118 aaPredicted RBP9.85□□□□□ -0.83
SMAD1-209ENST00000511125 MTFR1LQ9H019 292 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 GPSM2P81274 684 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 ECHDC1Q9NTX5 307 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 UFL1O94874 794 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 TTC22Q5TAA0 569 aa9.85□□□□□ -0.83
SMAD1-209ENST00000511125 BSDC1Q9NW68 430 aaPredicted RBP9.85□□□□□ -0.83
SMAD1-209ENST00000511125 ANKRD36CQ5JPF3 1778 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 PPEF1O14829 653 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-209ENST00000511125 HMGB2P26583 209 aaKnown RBP9.84□□□□□ -0.83
SMAD1-209ENST00000511125 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 CICQ96RK0 1608 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-209ENST00000511125 IFIT1P09914 478 aaKnown RBP9.84□□□□□ -0.83
SMAD1-209ENST00000511125 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
SMAD1-209ENST00000511125 SCN7AQ01118 1682 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 ZNF831Q5JPB2 1677 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 BCORQ6W2J9 1755 aa9.84□□□□□ -0.83
SMAD1-209ENST00000511125 CCDC158Q5M9N0 1113 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 PI4K2BQ8TCG2 481 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 ABCF2Q9UG63 623 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 CIAO1O76071 339 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 ZAP70P43403 619 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
SMAD1-209ENST00000511125 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 GPATCH3Q96I76 525 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 TNRC6CQ9HCJ0 1690 aaKnown RBP9.83□□□□□ -0.84
SMAD1-209ENST00000511125 SLC5A1P13866 664 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 NPR1P16066 1061 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 CWC27Q6UX04 472 aaKnown RBP9.83□□□□□ -0.84
SMAD1-209ENST00000511125 VGLL2Q8N8G2 317 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 AKAP2Q9Y2D5 859 aa9.83□□□□□ -0.84
SMAD1-209ENST00000511125 G3V3G9 751 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 CRY2Q49AN0 593 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 FSD1Q9BTV5 496 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-209ENST00000511125 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
SMAD1-209ENST00000511125 C8orf34Q49A92 452 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
SMAD1-209ENST00000511125 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
SMAD1-209ENST00000511125 PTGER2P43116 358 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 LPIN2Q92539 896 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 KCNQ5Q9NR82 932 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 F8W031 263 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms