RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SYMPKQ92797 1274 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 GINM1Q9NU53 330 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 PARP4Q9UKK3 1724 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 KIF7Q2M1P5 1343 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 PITPNM2Q9BZ72 1349 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 CASZ1Q86V15 1759 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 ADGRB1O14514 1584 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 AXDND1Q5T1B0 1012 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 WDR66Q8TBY9 1149 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 SMCR8Q8TEV9 937 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 PARK7Q99497 189 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 API5Q9BZZ5 524 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 ZBTB3Q9H5J0 574 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 ZCCHC17Q9NP64 241 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 LRRC4BQ9NT99 713 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 SRP68Q9UHB9 627 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 CHD4Q14839 1912 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 CNTNAP1P78357 1384 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 RASSF10A6NK89 507 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 IRS4O14654 1257 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 LBX1P52954 281 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 FCGRTP55899 365 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 FKBP5Q13451 457 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 NEUROD2Q15784 382 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 COPS6Q7L5N1 327 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 ANKRD13AQ8IZ07 590 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 DPF3Q92784 378 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 ZNF277Q9NRM2 450 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 CEP126Q9P2H0 1117 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SUGT1Q9Y2Z0 365 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 THSD7AQ9UPZ6 1657 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 DDNO94850 711 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SRGNP10124 158 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 YBX3P16989 372 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 TM4SF1P30408 202 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 KIAA2012Q0VF49 1180 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SLC39A6Q13433 755 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 TAF1CQ15572 869 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 DHX37Q8IY37 1157 aaKnown RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 KRI1Q8N9T8 703 aaKnown RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 ISY1Q9ULR0 285 aaKnown RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 FAM50BQ9Y247 325 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 AKAP12Q02952 1782 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 DCDC2CA8MYV0 355 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SLC9C1Q4G0N8 1177 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 CHRDL2Q6WN34 429 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 ANKRD23Q86SG2 305 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 CRACR2BQ8N4Y2 399 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SGIP1Q9BQI5 828 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 TLL2Q9Y6L7 1015 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 TNS1Q9HBL0 1735 aaKnown RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 HOXA10P31260 410 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 GMPSP49915 693 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 IRX3P78415 501 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-209ENST00000511124 SNAPC2Q13487 334 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 MICALL2Q8IY33 904 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 CRBNQ96SW2 442 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 GPRC5DQ9NZD1 345 aa3.51□□□□□ -1.85
CLOCK-209ENST00000511124 ZEB2O60315 1214 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ITPK1Q13572 414 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 NOM1Q5C9Z4 860 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 DZIP1Q86YF9 867 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 TEKT1Q969V4 418 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ZNF341Q9BYN7 854 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ANGEL1Q9UNK9 670 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 LAMB1P07942 1786 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ALS2Q96Q42 1657 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 RIMBP2O15034 1052 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 MSCO60682 206 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 GNAI3P08754 354 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 UQCRFS1P1P0C7P4 283 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ZBTB48P10074 688 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 IL13P35225 146 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 RASSF7Q02833 373 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 G3BP1Q13283 466 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 BMS1Q14692 1282 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 MTHFSDQ2M296 383 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 AAK1Q2M2I8 961 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 MFSD14CQ5VZR4 134 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 MAP1SQ66K74 1059 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ZSCAN25Q6NSZ9 544 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 FEZ1Q99689 392 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 IFT57Q9NWB7 429 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 TRIM17Q9Y577 477 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 TLR3O15455 904 aaKnown RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 TRPA1O75762 1119 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 CT47B1P0C2W7 299 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 VASPP50552 380 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-209ENST00000511124 KCNQ4P56696 695 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 CCDC158Q5M9N0 1113 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 SLC10A5Q5PT55 438 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 SAMD7Q7Z3H4 446 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 ERC1Q8IUD2 1116 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 PPP2R3CQ969Q6 453 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 SEZ6LQ9BYH1 1024 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 SRCIN1Q9C0H9 1055 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 WBP1LQ9NX94 342 aa3.5□□□□□ -1.85
CLOCK-209ENST00000511124 TCEAL9Q9UHQ7 104 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms