RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 KCNQ5Q9NR82 932 aa29.61■■■□□ 2.33
SMAD5-207ENST00000511116 USP48Q86UV5 1035 aa29.6■■■□□ 2.33
SMAD5-207ENST00000511116 CCDC191Q8NCU4 936 aa29.6■■■□□ 2.33
SMAD5-207ENST00000511116 POLR2AP24928 1970 aaKnown RBP29.6■■■□□ 2.33
SMAD5-207ENST00000511116 APAF1O14727 1248 aa29.59■■■□□ 2.33
SMAD5-207ENST00000511116 PCCAP05165 728 aaPredicted RBP29.59■■■□□ 2.33
SMAD5-207ENST00000511116 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
SMAD5-207ENST00000511116 ZNF408Q9H9D4 720 aa29.59■■■□□ 2.33
SMAD5-207ENST00000511116 SEC31BQ9NQW1 1179 aa29.59■■■□□ 2.33
SMAD5-207ENST00000511116 VIL1P09327 827 aaKnown RBP29.58■■■□□ 2.33
SMAD5-207ENST00000511116 DOK7Q18PE1 504 aa29.58■■■□□ 2.33
SMAD5-207ENST00000511116 TBC1D10BQ4KMP7 808 aaPredicted RBP29.58■■■□□ 2.33
SMAD5-207ENST00000511116 NOGQ13253 232 aa29.57■■■□□ 2.32
SMAD5-207ENST00000511116 DLK2Q6UY11 383 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 KRT26Q7Z3Y9 468 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 C8orf58Q8NAV2 365 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 MYD88Q99836 296 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 ZC3H12CQ9C0D7 883 aaKnown RBP29.56■■■□□ 2.32
SMAD5-207ENST00000511116 TSKSQ9UJT2 592 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 PSME4Q14997 1843 aa29.56■■■□□ 2.32
SMAD5-207ENST00000511116 PDE8AO60658 829 aa29.55■■■□□ 2.32
SMAD5-207ENST00000511116 HUNKP57058 714 aa29.55■■■□□ 2.32
SMAD5-207ENST00000511116 CCDC152Q4G0S7 254 aa29.55■■■□□ 2.32
SMAD5-207ENST00000511116 METTL22Q9BUU2 404 aaPredicted RBP29.55■■■□□ 2.32
SMAD5-207ENST00000511116 CWC25Q9NXE8 425 aaPredicted RBP29.54■■■□□ 2.32
SMAD5-207ENST00000511116 ELL2O00472 640 aaPredicted RBP29.53■■■□□ 2.32
SMAD5-207ENST00000511116 UFL1O94874 794 aa29.53■■■□□ 2.32
SMAD5-207ENST00000511116 ZIC5Q96T25 663 aa29.53■■■□□ 2.32
SMAD5-207ENST00000511116 GGA1Q9UJY5 639 aa29.53■■■□□ 2.32
SMAD5-207ENST00000511116 FAM155AB1AL88 458 aaPredicted RBP29.52■■■□□ 2.32
SMAD5-207ENST00000511116 KIF4BQ2VIQ3 1234 aa29.52■■■□□ 2.32
SMAD5-207ENST00000511116 DCPSQ96C86 337 aaKnown RBP29.52■■■□□ 2.32
SMAD5-207ENST00000511116 CHMP4AQ9BY43 222 aa29.52■■■□□ 2.32
SMAD5-207ENST00000511116 GBA2Q9HCG7 927 aaPredicted RBP29.52■■■□□ 2.32
SMAD5-207ENST00000511116 CASP8AP2Q9UKL3 1982 aa29.52■■■□□ 2.32
SMAD5-207ENST00000511116 ADM5C9JUS6 153 aa29.51■■■□□ 2.31
SMAD5-207ENST00000511116 ZNF280AP59817 542 aaPredicted RBP29.51■■■□□ 2.31
SMAD5-207ENST00000511116 ANKIB1Q9P2G1 1089 aa29.51■■■□□ 2.31
SMAD5-207ENST00000511116 CCDC30Q5VVM6 783 aa29.5■■■□□ 2.31
SMAD5-207ENST00000511116 RGMBQ6NW40 437 aa29.5■■■□□ 2.31
SMAD5-207ENST00000511116 AGBL3Q8NEM8 1001 aa29.5■■■□□ 2.31
SMAD5-207ENST00000511116 XDHP47989 1333 aa29.49■■■□□ 2.31
SMAD5-207ENST00000511116 DDX58O95786 925 aaKnown RBP29.49■■■□□ 2.31
SMAD5-207ENST00000511116 RGS19P49795 217 aa29.49■■■□□ 2.31
SMAD5-207ENST00000511116 GMLQ99445 158 aa29.49■■■□□ 2.31
SMAD5-207ENST00000511116 RBM26Q5T8P6 1007 aaKnown RBP29.48■■■□□ 2.31
SMAD5-207ENST00000511116 RSBN1LQ6PCB5 846 aaPredicted RBP29.48■■■□□ 2.31
SMAD5-207ENST00000511116 C2orf69Q8N8R5 385 aa29.48■■■□□ 2.31
SMAD5-207ENST00000511116 TSPYL6Q8N831 410 aa29.47■■■□□ 2.31
SMAD5-207ENST00000511116 GGA3Q9NZ52 723 aa29.47■■■□□ 2.31
SMAD5-207ENST00000511116 IGKV5-2P06315 115 aa29.46■■■□□ 2.31
SMAD5-207ENST00000511116 ANKRD18AQ8IVF6 992 aa29.46■■■□□ 2.31
SMAD5-207ENST00000511116 JARID2Q92833 1246 aaPredicted RBP29.46■■■□□ 2.31
SMAD5-207ENST00000511116 CCDC102AQ96A19 550 aa29.46■■■□□ 2.31
SMAD5-207ENST00000511116 MAP3K2Q9Y2U5 619 aa29.46■■■□□ 2.31
SMAD5-207ENST00000511116 ASTN2O75129 1339 aaPredicted RBP29.45■■■□□ 2.31
SMAD5-207ENST00000511116 CTSWP56202 376 aa29.45■■■□□ 2.31
SMAD5-207ENST00000511116 KSR2Q6VAB6 950 aa29.45■■■□□ 2.31
SMAD5-207ENST00000511116 SULF1Q8IWU6 871 aa29.45■■■□□ 2.31
SMAD5-207ENST00000511116 MCOLN1Q9GZU1 580 aa29.45■■■□□ 2.31
SMAD5-207ENST00000511116 MYH3P11055 1940 aa29.45■■■□□ 2.3
SMAD5-207ENST00000511116 ATP2B4P23634 1241 aa29.44■■■□□ 2.3
SMAD5-207ENST00000511116 PODNQ7Z5L7 613 aa29.44■■■□□ 2.3
SMAD5-207ENST00000511116 SAGE1Q9NXZ1 904 aa29.44■■■□□ 2.3
SMAD5-207ENST00000511116 TTLL11Q8NHH1 800 aa29.43■■■□□ 2.3
SMAD5-207ENST00000511116 CCDC85AQ96PX6 553 aaPredicted RBP29.43■■■□□ 2.3
SMAD5-207ENST00000511116 ZNF646O15015 1829 aaPredicted RBP29.43■■■□□ 2.3
SMAD5-207ENST00000511116 PI4KAP2A4QPH2 592 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 G3V3G9 751 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 FAM161AQ3B820 660 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 DCAF8Q5TAQ9 597 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 PI4KAP1Q8N8J0 262 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 CDCA5Q96FF9 252 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 CDC5LQ99459 802 aaKnown RBP29.42■■■□□ 2.3
SMAD5-207ENST00000511116 PITPNM2Q9BZ72 1349 aa29.42■■■□□ 2.3
SMAD5-207ENST00000511116 MED23Q9ULK4 1368 aa29.41■■■□□ 2.3
SMAD5-207ENST00000511116 CCDC85CA6NKD9 419 aa29.41■■■□□ 2.3
SMAD5-207ENST00000511116 SLC10A3P09131 477 aa29.41■■■□□ 2.3
SMAD5-207ENST00000511116 SCARF1Q14162 830 aa29.41■■■□□ 2.3
SMAD5-207ENST00000511116 CCDC27Q2M243 656 aa29.41■■■□□ 2.3
SMAD5-207ENST00000511116 BSDC1Q9NW68 430 aaPredicted RBP29.41■■■□□ 2.3
SMAD5-207ENST00000511116 USP17L3A6NCW0 530 aa29.4■■■□□ 2.3
SMAD5-207ENST00000511116 USP17L4A6NCW7 530 aa29.4■■■□□ 2.3
SMAD5-207ENST00000511116 ZNF157P51786 506 aaPredicted RBP29.4■■■□□ 2.3
SMAD5-207ENST00000511116 KIF23Q02241 960 aaPredicted RBP29.4■■■□□ 2.3
SMAD5-207ENST00000511116 USP17L1Q7RTZ2 530 aa29.4■■■□□ 2.3
SMAD5-207ENST00000511116 USP17L8P0C7I0 530 aa29.39■■■□□ 2.3
SMAD5-207ENST00000511116 ANGEL2Q5VTE6 544 aaKnown RBP29.39■■■□□ 2.3
SMAD5-207ENST00000511116 MYOZ2Q9NPC6 264 aa29.39■■■□□ 2.3
SMAD5-207ENST00000511116 MINPP1Q9UNW1 487 aa29.39■■■□□ 2.3
SMAD5-207ENST00000511116 WTIPA6NIX2 430 aaPredicted RBP29.38■■■□□ 2.29
SMAD5-207ENST00000511116 FKBP1BP68106 108 aa29.38■■■□□ 2.29
SMAD5-207ENST00000511116 GREM2Q9H772 168 aa29.38■■■□□ 2.29
SMAD5-207ENST00000511116 PAPPA2Q9BXP8 1791 aa29.38■■■□□ 2.29
SMAD5-207ENST00000511116 NEURL1BA8MQ27 555 aa29.37■■■□□ 2.29
SMAD5-207ENST00000511116 TSR2Q969E8 191 aaKnown RBP29.37■■■□□ 2.29
SMAD5-207ENST00000511116 AKAP11Q9UKA4 1901 aa29.36■■■□□ 2.29
SMAD5-207ENST00000511116 H7C1W4 665 aa29.36■■■□□ 2.29
SMAD5-207ENST00000511116 NEXNQ0ZGT2 675 aa29.36■■■□□ 2.29
SMAD5-207ENST00000511116 DGKZQ13574 1117 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms